RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 LLGL2Q6P1M3 1020 aa7.29□□□□□ -1.24
SCFD1-219ENST00000556413 PICK1Q9NRD5 415 aa7.29□□□□□ -1.24
SCFD1-219ENST00000556413 GTF2IRD1Q9UHL9 959 aa7.29□□□□□ -1.24
SCFD1-219ENST00000556413 ZBTB37Q5TC79 503 aa7.28□□□□□ -1.24
SCFD1-219ENST00000556413 SLC23A3Q6PIS1 610 aa7.28□□□□□ -1.24
SCFD1-219ENST00000556413 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
SCFD1-219ENST00000556413 ANKRD24Q8TF21 1146 aa7.28□□□□□ -1.24
SCFD1-219ENST00000556413 WWC3Q9ULE0 1092 aa7.28□□□□□ -1.24
SCFD1-219ENST00000556413 PCDHA4Q9UN74 947 aa7.28□□□□□ -1.24
SCFD1-219ENST00000556413 GIPC1O14908 333 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 EOMESO95936 686 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 LRRC14Q15048 493 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 NKPD1Q17RQ9 610 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 SCARA3Q6AZY7 606 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 ALG1LQ6GMV1 187 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 ZSCAN29Q8IWY8 852 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-219ENST00000556413 TMEM40Q8WWA1 233 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 ASB11Q8WXH4 323 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 PRDM7Q9NQW5 492 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 CYP8B1Q9UNU6 501 aa7.27□□□□□ -1.25
SCFD1-219ENST00000556413 CELA3AP09093 270 aa7.26□□□□□ -1.25
SCFD1-219ENST00000556413 CDC37L1Q7L3B6 337 aa7.26□□□□□ -1.25
SCFD1-219ENST00000556413 ASB16Q96NS5 453 aa7.26□□□□□ -1.25
SCFD1-219ENST00000556413 PTPN11Q06124 597 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-219ENST00000556413 INPP5AQ14642 412 aa7.25□□□□□ -1.25
SCFD1-219ENST00000556413 PCNX4Q63HM2 1172 aa7.25□□□□□ -1.25
SCFD1-219ENST00000556413 ERICH6Q7L0X2 663 aa7.25□□□□□ -1.25
SCFD1-219ENST00000556413 ARMCX6Q7L4S7 300 aa7.25□□□□□ -1.25
SCFD1-219ENST00000556413 ELMO3Q96BJ8 720 aa7.25□□□□□ -1.25
SCFD1-219ENST00000556413 FARP2O94887 1054 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-219ENST00000556413 LRIG2O94898 1065 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 ZP2Q05996 745 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 IKZF1Q13422 519 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 ZNF124Q15973 351 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 KCT2Q8NC54 265 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 FLAD1Q8NFF5 587 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 ZNF507Q8TCN5 953 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 C12orf49Q9H741 205 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 SPG7Q9UQ90 795 aa7.24□□□□□ -1.25
SCFD1-219ENST00000556413 GNAT3A8MTJ3 354 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 USP17L7P0C7H9 530 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 LRFN4Q6PJG9 635 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 CYFIP1Q7L576 1253 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 PRDM5Q9NQX1 630 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-219ENST00000556413 FAM8A1Q9UBU6 413 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 MAPK8IP1Q9UQF2 711 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 IVNS1ABPQ9Y6Y0 642 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 PITPNM2Q9BZ72 1349 aa7.23□□□□□ -1.25
SCFD1-219ENST00000556413 PRAMEF27A3QJZ7 478 aa7.22□□□□□ -1.25
SCFD1-219ENST00000556413 SLITRK5O94991 958 aa7.22□□□□□ -1.25
SCFD1-219ENST00000556413 CLCN7P51798 805 aa7.22□□□□□ -1.25
SCFD1-219ENST00000556413 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
SCFD1-219ENST00000556413 SLBPQ14493 270 aaKnown RBP eCLIP7.22□□□□□ -1.25
SCFD1-219ENST00000556413 PLPPR2Q96GM1 343 aa7.22□□□□□ -1.25
SCFD1-219ENST00000556413 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
SCFD1-219ENST00000556413 FBRSQ9HAH7 460 aa7.22□□□□□ -1.25
SCFD1-219ENST00000556413 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-219ENST00000556413 ZSWIM9Q86XI8 627 aa7.21□□□□□ -1.26
SCFD1-219ENST00000556413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCFD1-219ENST00000556413 CNTNAP4Q9C0A0 1308 aa7.21□□□□□ -1.26
SCFD1-219ENST00000556413 PRR33A8MZF0 331 aa7.2□□□□□ -1.26
SCFD1-219ENST00000556413 P4HBP07237 508 aaKnown RBP7.2□□□□□ -1.26
SCFD1-219ENST00000556413 SV2BQ7L1I2 683 aa7.2□□□□□ -1.26
SCFD1-219ENST00000556413 GAL3ST3Q96A11 431 aa7.2□□□□□ -1.26
SCFD1-219ENST00000556413 WNT10AQ9GZT5 417 aa7.2□□□□□ -1.26
SCFD1-219ENST00000556413 CTNND2Q9UQB3 1225 aa7.2□□□□□ -1.26
SCFD1-219ENST00000556413 ZNF503-AS2A6NEH8 195 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 DBX1A6NMT0 343 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 CDK8P49336 464 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 MESP2Q0VG99 397 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 NKG7Q16617 165 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 HDXQ7Z353 690 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 KSR1Q8IVT5 923 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 HSPA12BQ96MM6 686 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 MIPEPQ99797 713 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 SEMA3GQ9NS98 782 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 LMCD1Q9NZU5 365 aa7.19□□□□□ -1.26
SCFD1-219ENST00000556413 LRRC10BA6NIK2 292 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 ZNF865P0CJ78 1059 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-219ENST00000556413 CAP2P40123 477 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 PKN1Q16512 942 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 KCNMB1Q16558 191 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 TTBK2Q6IQ55 1244 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 C22orf34Q6ZV56 151 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 RIN3Q8TB24 985 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 CARS2Q9HA77 564 aaKnown RBP7.18□□□□□ -1.26
SCFD1-219ENST00000556413 ATP13A1Q9HD20 1204 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 TPX2Q9ULW0 747 aaKnown RBP7.18□□□□□ -1.26
SCFD1-219ENST00000556413 TTF2Q9UNY4 1162 aaKnown RBP7.18□□□□□ -1.26
SCFD1-219ENST00000556413 SNCAIPQ9Y6H5 919 aa7.18□□□□□ -1.26
SCFD1-219ENST00000556413 FAM155AB1AL88 458 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-219ENST00000556413 LDHBP07195 334 aaKnown RBP7.17□□□□□ -1.26
SCFD1-219ENST00000556413 ETF1P62495 437 aaKnown RBP7.17□□□□□ -1.26
SCFD1-219ENST00000556413 KCNA1Q09470 495 aa7.17□□□□□ -1.26
SCFD1-219ENST00000556413 WIPI1Q5MNZ9 446 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-219ENST00000556413 SFRP5Q5T4F7 317 aa7.17□□□□□ -1.26
SCFD1-219ENST00000556413 CDKAL1Q5VV42 579 aa7.17□□□□□ -1.26
SCFD1-219ENST00000556413 FYB2Q5VWT5 728 aa7.17□□□□□ -1.26
SCFD1-219ENST00000556413 HID1Q8IV36 788 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 490.8 ms