RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-206	ENST00000556375	TBC1D8	O95759	1140 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	SLURP2	P0DP57	97 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	CETP	P11597	493 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	USP5	P45974	858 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	SNAPC2	Q13487	334 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	TSHZ3	Q63HK5	1081 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	PTPN18	Q99952	460 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	PICK1	Q9NRD5	415 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	KCNH4	Q9UQ05	1017 aa		13.95	□□□□□ -0.18
SLIRP-206	ENST00000556375	SALL3	Q9BXA9	1300 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	ERC2	O15083	957 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	HLA-DOA	P06340	250 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	MX1	P20591	662 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	UBE3C	Q15386	1083 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	ZSCAN25	Q6NSZ9	544 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	METTL16	Q86W50	562 aa	Known RBP	13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	RWDD1	Q9H446	243 aa	Predicted RBP	13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	SAP30BP	Q9UHR5	308 aa	Known RBP	13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	PALD1	Q9ULE6	856 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	MYH8	P13535	1937 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	LOC285556	D6RIA3	1793 aa		13.94	□□□□□ -0.18
SLIRP-206	ENST00000556375	GLRX3	O76003	335 aa	Known RBP	13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	PTPRA	P18433	802 aa		13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	ANKRD45	Q5TZF3	282 aa		13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	SMC5	Q8IY18	1101 aa		13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	LCORL	Q8N3X6	602 aa		13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	KBTBD3	Q8NAB2	608 aa		13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	PI4K2B	Q8TCG2	481 aa		13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	DNAJC18	Q9H819	358 aa		13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	ZCCHC17	Q9NP64	241 aa	Known RBP	13.93	□□□□□ -0.18
SLIRP-206	ENST00000556375	GPR25	O00155	361 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	CXCL11	O14625	94 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	MBD4	O95243	580 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	CRHR2	Q13324	411 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	FAM43A	Q8N2R8	423 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	TRIM34	Q9BYJ4	488 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	EHD4	Q9H223	541 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	R3HDML	Q9H3Y0	253 aa		13.92	□□□□□ -0.18
SLIRP-206	ENST00000556375	BTBD19	C9JJ37	291 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	CAP2	P40123	477 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	TAF1C	Q15572	869 aa	Predicted RBP	13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	SLFNL1	Q499Z3	407 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	IFFO2	Q5TF58	517 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	TTC6	Q86TZ1	520 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	ARMT1	Q9H993	441 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	AFG3L2	Q9Y4W6	797 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375	ZHX2	Q9Y6X8	837 aa		13.91	□□□□□ -0.18
SLIRP-206	ENST00000556375		A0A0G2JLL6	359 aa	Predicted RBP	13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	FKTN	O75072	461 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	CHGB	P05060	677 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	ZFY	P08048	801 aa	Predicted RBP	13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	RRP1B	Q14684	758 aa	Known RBP	13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	SLC4A8	Q2Y0W8	1093 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	ANKRD23	Q86SG2	305 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	SDR42E1	Q8WUS8	393 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	TBC1D2	Q9BYX2	928 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	GINM1	Q9NU53	330 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	STAP2	Q9UGK3	403 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	SERPINB13	Q9UIV8	391 aa		13.9	□□□□□ -0.18
SLIRP-206	ENST00000556375	IGHD	P01880	384 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	ASNS	P08243	561 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	MOGS	Q13724	837 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	CTU1	Q7Z7A3	348 aa	Known RBP	13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	CCDC84	Q86UT8	332 aa	Predicted RBP	13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	APPBP2	Q92624	585 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	LNPK	Q9C0E8	428 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	PUS7L	Q9H0K6	701 aa	Known RBP	13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	ZFYVE28	Q9HCC9	887 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	ATP8A2	Q9NTI2	1148 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	MCM9	Q9NXL9	1143 aa		13.89	□□□□□ -0.19
SLIRP-206	ENST00000556375	TRIM75P	A6NK02	468 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	USP17L5	A8MUK1	530 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	RNF113A	O15541	343 aa	Known RBP	13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	POLR3D	P05423	398 aa	Predicted RBP	13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	PDE1A	P54750	535 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	IRX6	P78412	446 aa	Predicted RBP	13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	DGKZ	Q13574	1117 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	TATDN1	Q6P1N9	297 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	FASTKD5	Q7L8L6	764 aa	Known RBP	13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	MCOLN1	Q9GZU1	580 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	TAOK2	Q9UL54	1235 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	ZBTB21	Q9ULJ3	1066 aa		13.88	□□□□□ -0.19
SLIRP-206	ENST00000556375	PDHX	O00330	501 aa		13.87	□□□□□ -0.19
SLIRP-206	ENST00000556375	PRKAB2	O43741	272 aa		13.87	□□□□□ -0.19
SLIRP-206	ENST00000556375	GDF11	O95390	407 aa		13.87	□□□□□ -0.19
SLIRP-206	ENST00000556375	PLCD1	P51178	756 aa		13.87	□□□□□ -0.19
SLIRP-206	ENST00000556375	NUCB1	Q02818	461 aa		13.87	□□□□□ -0.19
SLIRP-206	ENST00000556375	GABPA	Q06546	454 aa		13.87	□□□□□ -0.19
SLIRP-206	ENST00000556375	CHD1L	Q86WJ1	897 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms