RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 ITIH2P19823 946 aa8.33□□□□□ -1.08
PCNX4-212ENST00000556360 NKPD1Q17RQ9 610 aa8.33□□□□□ -1.08
PCNX4-212ENST00000556360 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
PCNX4-212ENST00000556360 ASB11Q8WXH4 323 aa8.33□□□□□ -1.08
PCNX4-212ENST00000556360 OSBPL7Q9BZF2 842 aa8.33□□□□□ -1.08
PCNX4-212ENST00000556360 FARP2O94887 1054 aaPredicted RBP8.32□□□□□ -1.08
PCNX4-212ENST00000556360 EOMESO95936 686 aa8.32□□□□□ -1.08
PCNX4-212ENST00000556360 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
PCNX4-212ENST00000556360 LLGL2Q6P1M3 1020 aa8.32□□□□□ -1.08
PCNX4-212ENST00000556360 ARID3AQ99856 593 aa8.32□□□□□ -1.08
PCNX4-212ENST00000556360 KRTAP4-7Q9BYR0 210 aa8.32□□□□□ -1.08
PCNX4-212ENST00000556360 CLCN7P51798 805 aa8.31□□□□□ -1.08
PCNX4-212ENST00000556360 LRRC14Q15048 493 aa8.31□□□□□ -1.08
PCNX4-212ENST00000556360 KCT2Q8NC54 265 aa8.31□□□□□ -1.08
PCNX4-212ENST00000556360 CYP8B1Q9UNU6 501 aa8.31□□□□□ -1.08
PCNX4-212ENST00000556360 PITPNM2Q9BZ72 1349 aa8.3□□□□□ -1.08
PCNX4-212ENST00000556360 DCDC2CA8MYV0 355 aa8.3□□□□□ -1.08
PCNX4-212ENST00000556360 ALG1LQ6GMV1 187 aa8.3□□□□□ -1.08
PCNX4-212ENST00000556360 C12orf40Q86WS4 652 aa8.3□□□□□ -1.08
PCNX4-212ENST00000556360 MAPK8IP1Q9UQF2 711 aa8.3□□□□□ -1.08
PCNX4-212ENST00000556360 CSADQ9Y600 493 aa8.3□□□□□ -1.08
PCNX4-212ENST00000556360 LRIG2O94898 1065 aa8.29□□□□□ -1.08
PCNX4-212ENST00000556360 C22orf34Q6ZV56 151 aa8.29□□□□□ -1.08
PCNX4-212ENST00000556360 ARMCX6Q7L4S7 300 aa8.29□□□□□ -1.08
PCNX4-212ENST00000556360 ASB16Q96NS5 453 aa8.29□□□□□ -1.08
PCNX4-212ENST00000556360 DBX1A6NMT0 343 aa8.28□□□□□ -1.08
PCNX4-212ENST00000556360 FBXO24O75426 580 aa8.28□□□□□ -1.08
PCNX4-212ENST00000556360 CAP2P40123 477 aa8.28□□□□□ -1.08
PCNX4-212ENST00000556360 SETDB2Q96T68 719 aa8.28□□□□□ -1.08
PCNX4-212ENST00000556360 PRDM5Q9NQX1 630 aaPredicted RBP8.28□□□□□ -1.08
PCNX4-212ENST00000556360 LMCD1Q9NZU5 365 aa8.28□□□□□ -1.08
PCNX4-212ENST00000556360 PCDHA4Q9UN74 947 aa8.28□□□□□ -1.08
PCNX4-212ENST00000556360 ZP2Q05996 745 aa8.27□□□□□ -1.09
PCNX4-212ENST00000556360 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
PCNX4-212ENST00000556360 IKZF1Q13422 519 aa8.27□□□□□ -1.09
PCNX4-212ENST00000556360 CYFIP1Q7L576 1253 aa8.27□□□□□ -1.09
PCNX4-212ENST00000556360 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-212ENST00000556360 BHLHE22Q8NFJ8 381 aaPredicted RBP8.27□□□□□ -1.09
PCNX4-212ENST00000556360 ZNF507Q8TCN5 953 aa8.27□□□□□ -1.09
PCNX4-212ENST00000556360 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
PCNX4-212ENST00000556360 CTNND2Q9UQB3 1225 aa8.27□□□□□ -1.09
PCNX4-212ENST00000556360 GNAT3A8MTJ3 354 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 SLITRK5O94991 958 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 CELA3AP09093 270 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 ZNF865P0CJ78 1059 aaPredicted RBP8.26□□□□□ -1.09
PCNX4-212ENST00000556360 MAPK8P45983 427 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 PCNX4Q63HM2 1172 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 CDC37L1Q7L3B6 337 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 ZSWIM9Q86XI8 627 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 FOXQ1Q9C009 403 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 PRDM7Q9NQW5 492 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 PICK1Q9NRD5 415 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.26□□□□□ -1.09
PCNX4-212ENST00000556360 FAM8A1Q9UBU6 413 aa8.26□□□□□ -1.09
PCNX4-212ENST00000556360 INPP5AQ14642 412 aa8.25□□□□□ -1.09
PCNX4-212ENST00000556360 ZNF124Q15973 351 aa8.25□□□□□ -1.09
PCNX4-212ENST00000556360 LRFN4Q6PJG9 635 aa8.25□□□□□ -1.09
PCNX4-212ENST00000556360 GAL3ST3Q96A11 431 aa8.25□□□□□ -1.09
PCNX4-212ENST00000556360 SPG7Q9UQ90 795 aa8.25□□□□□ -1.09
PCNX4-212ENST00000556360 ZNF503-AS2A6NEH8 195 aa8.24□□□□□ -1.09
PCNX4-212ENST00000556360 SLBPQ14493 270 aaKnown RBP eCLIP8.24□□□□□ -1.09
PCNX4-212ENST00000556360 ELMO3Q96BJ8 720 aa8.24□□□□□ -1.09
PCNX4-212ENST00000556360 SEMA3GQ9NS98 782 aa8.24□□□□□ -1.09
PCNX4-212ENST00000556360 FAM53CQ9NYF3 392 aa8.24□□□□□ -1.09
PCNX4-212ENST00000556360 WWC3Q9ULE0 1092 aa8.24□□□□□ -1.09
PCNX4-212ENST00000556360 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.23□□□□□ -1.09
PCNX4-212ENST00000556360 SUPT5HO00267 1087 aaKnown RBP8.23□□□□□ -1.09
PCNX4-212ENST00000556360 USP17L7P0C7H9 530 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 PTPN11Q06124 597 aaPredicted RBP8.23□□□□□ -1.09
PCNX4-212ENST00000556360 PKN1Q16512 942 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 SV2BQ7L1I2 683 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 FAM84AQ96KN4 292 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 FRMD6Q96NE9 622 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 WNT10AQ9GZT5 417 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 FBRSQ9HAH7 460 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 SNCAIPQ9Y6H5 919 aa8.23□□□□□ -1.09
PCNX4-212ENST00000556360 ATP2B2Q01814 1243 aa8.22□□□□□ -1.09
PCNX4-212ENST00000556360 KCNMB1Q16558 191 aa8.22□□□□□ -1.09
PCNX4-212ENST00000556360 SPOCD1Q6ZMY3 1216 aa8.22□□□□□ -1.09
PCNX4-212ENST00000556360 HDXQ7Z353 690 aa8.22□□□□□ -1.09
PCNX4-212ENST00000556360 CILP2Q8IUL8 1156 aa8.22□□□□□ -1.09
PCNX4-212ENST00000556360 MFSD2AQ8NA29 543 aa8.22□□□□□ -1.09
PCNX4-212ENST00000556360 PLPPR2Q96GM1 343 aa8.22□□□□□ -1.09
PCNX4-212ENST00000556360 PRR33A8MZF0 331 aa8.21□□□□□ -1.1
PCNX4-212ENST00000556360 AFMP43652 599 aa8.21□□□□□ -1.1
PCNX4-212ENST00000556360 SLC38A3Q99624 504 aa8.21□□□□□ -1.1
PCNX4-212ENST00000556360 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
PCNX4-212ENST00000556360 LRRC10BA6NIK2 292 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 NKG7Q16617 165 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 SFRP5Q5T4F7 317 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 THAP5Q7Z6K1 395 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 MFSD4AQ8N468 514 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 ST14Q9Y5Y6 855 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 TACC3Q9Y6A5 838 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 CAPN6Q9Y6Q1 641 aa8.2□□□□□ -1.1
PCNX4-212ENST00000556360 PRAMEF27A3QJZ7 478 aa8.19□□□□□ -1.1
PCNX4-212ENST00000556360 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms