RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TMEM67Q5HYA8 995 aa7.26□□□□□ -1.25
SCFD1-218ENST00000556256 PPM1JQ5JR12 505 aa7.26□□□□□ -1.25
SCFD1-218ENST00000556256 MPRIPQ6WCQ1 1025 aa7.26□□□□□ -1.25
SCFD1-218ENST00000556256 UBE3DQ7Z6J8 389 aa7.26□□□□□ -1.25
SCFD1-218ENST00000556256 PPP4R2Q9NY27 417 aa7.26□□□□□ -1.25
SCFD1-218ENST00000556256 CSADQ9Y600 493 aa7.26□□□□□ -1.25
SCFD1-218ENST00000556256 GNAT3A8MTJ3 354 aa7.25□□□□□ -1.25
SCFD1-218ENST00000556256 PRRG2O14669 202 aa7.25□□□□□ -1.25
SCFD1-218ENST00000556256 ZNF252P-AS1Q0IIN9 211 aa7.25□□□□□ -1.25
SCFD1-218ENST00000556256 CSRNP1Q96S65 589 aa7.25□□□□□ -1.25
SCFD1-218ENST00000556256 CARS2Q9HA77 564 aaKnown RBP7.25□□□□□ -1.25
SCFD1-218ENST00000556256 C19orf73Q9NVV2 129 aa7.25□□□□□ -1.25
SCFD1-218ENST00000556256 CACNA2D2Q9NY47 1150 aa7.25□□□□□ -1.25
SCFD1-218ENST00000556256 NCANO14594 1321 aa7.25□□□□□ -1.25
SCFD1-218ENST00000556256 XRCC5P13010 732 aaKnown RBP7.24□□□□□ -1.25
SCFD1-218ENST00000556256 NME2P22392 152 aa7.24□□□□□ -1.25
SCFD1-218ENST00000556256 PI16Q6UXB8 463 aa7.24□□□□□ -1.25
SCFD1-218ENST00000556256 TTLL10Q6ZVT0 673 aa7.24□□□□□ -1.25
SCFD1-218ENST00000556256 CCDC82Q8N4S0 544 aa7.24□□□□□ -1.25
SCFD1-218ENST00000556256 TMC1Q8TDI8 760 aa7.24□□□□□ -1.25
SCFD1-218ENST00000556256 ACSBG1Q96GR2 724 aa7.24□□□□□ -1.25
SCFD1-218ENST00000556256 EMILIN2Q9BXX0 1053 aa7.24□□□□□ -1.25
SCFD1-218ENST00000556256 NFIBO00712 420 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 GDNFP39905 211 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 RING1Q06587 406 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 C12orf40Q86WS4 652 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 BCO2Q9BYV7 579 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 ATP13A1Q9HD20 1204 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 SEMA3GQ9NS98 782 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 AKAP2Q9Y2D5 859 aa7.23□□□□□ -1.25
SCFD1-218ENST00000556256 DCDC2CA8MYV0 355 aa7.22□□□□□ -1.25
SCFD1-218ENST00000556256 B8ZZF3 427 aa7.22□□□□□ -1.25
SCFD1-218ENST00000556256 AMIGO3Q86WK7 504 aa7.22□□□□□ -1.25
SCFD1-218ENST00000556256 FBXO15Q8NCQ5 510 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-218ENST00000556256 DIRC2Q96SL1 478 aa7.22□□□□□ -1.25
SCFD1-218ENST00000556256 CBX8Q9HC52 389 aa7.22□□□□□ -1.25
SCFD1-218ENST00000556256 PRDM5Q9NQX1 630 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-218ENST00000556256 NLRP2Q9NX02 1062 aa7.22□□□□□ -1.25
SCFD1-218ENST00000556256 FANCGO15287 622 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 ZBTB37Q5TC79 503 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 GRIN3AQ8TCU5 1115 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 FOXQ1Q9C009 403 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 NSUN3Q9H649 340 aaKnown RBP7.21□□□□□ -1.26
SCFD1-218ENST00000556256 KCNK12Q9HB15 430 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 PICK1Q9NRD5 415 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 MAPK8IP1Q9UQF2 711 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 CNTNAP4Q9C0A0 1308 aa7.21□□□□□ -1.26
SCFD1-218ENST00000556256 PRR33A8MZF0 331 aa7.2□□□□□ -1.26
SCFD1-218ENST00000556256 NPIPB6E9PJ23 425 aa7.2□□□□□ -1.26
SCFD1-218ENST00000556256 NPAS4Q8IUM7 802 aa7.2□□□□□ -1.26
SCFD1-218ENST00000556256 FAM155AB1AL88 458 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-218ENST00000556256 TMEM253P0C7T8 217 aa7.19□□□□□ -1.26
SCFD1-218ENST00000556256 BMP6P22004 513 aa7.19□□□□□ -1.26
SCFD1-218ENST00000556256 BUD31P41223 144 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-218ENST00000556256 CDKAL1Q5VV42 579 aa7.19□□□□□ -1.26
SCFD1-218ENST00000556256 ARMCX6Q7L4S7 300 aa7.19□□□□□ -1.26
SCFD1-218ENST00000556256 ALKBH8Q96BT7 664 aaKnown RBP7.19□□□□□ -1.26
SCFD1-218ENST00000556256 DMRTB1Q96MA1 342 aa7.19□□□□□ -1.26
SCFD1-218ENST00000556256 NECAB3Q96P71 396 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-218ENST00000556256 RAPGEFL1Q9UHV5 662 aa7.19□□□□□ -1.26
SCFD1-218ENST00000556256 SLITRK5O94991 958 aa7.18□□□□□ -1.26
SCFD1-218ENST00000556256 NXPE4Q6UWF7 544 aa7.18□□□□□ -1.26
SCFD1-218ENST00000556256 LRIG2O94898 1065 aa7.17□□□□□ -1.26
SCFD1-218ENST00000556256 B4GALNT3Q6L9W6 998 aa7.17□□□□□ -1.26
SCFD1-218ENST00000556256 ATG14Q6ZNE5 492 aa7.17□□□□□ -1.26
SCFD1-218ENST00000556256 KCT2Q8NC54 265 aa7.17□□□□□ -1.26
SCFD1-218ENST00000556256 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
SCFD1-218ENST00000556256 CD320Q9NPF0 282 aa7.17□□□□□ -1.26
SCFD1-218ENST00000556256 DCP1AQ9NPI6 582 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-218ENST00000556256 H3BS24 57 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 PAGE1O75459 146 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 TRIM37O94972 964 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 KCNA10Q16322 511 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 C3orf58Q8NDZ4 430 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 RBCK1Q9BYM8 510 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 PCDHA4Q9UN74 947 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 ST14Q9Y5Y6 855 aa7.16□□□□□ -1.26
SCFD1-218ENST00000556256 ENC1O14682 589 aa7.15□□□□□ -1.26
SCFD1-218ENST00000556256 INHBBP09529 407 aa7.15□□□□□ -1.26
SCFD1-218ENST00000556256 FGD1P98174 961 aa7.15□□□□□ -1.26
SCFD1-218ENST00000556256 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
SCFD1-218ENST00000556256 SFRP5Q5T4F7 317 aa7.15□□□□□ -1.26
SCFD1-218ENST00000556256 C22orf34Q6ZV56 151 aa7.15□□□□□ -1.26
SCFD1-218ENST00000556256 MFSD4AQ8N468 514 aa7.15□□□□□ -1.26
SCFD1-218ENST00000556256 ZNF507Q8TCN5 953 aa7.15□□□□□ -1.26
SCFD1-218ENST00000556256 TPX2Q9ULW0 747 aaKnown RBP7.15□□□□□ -1.26
SCFD1-218ENST00000556256 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 RASIP1Q5U651 963 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 CIAPIN1Q6FI81 312 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 TPTE2Q6XPS3 522 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 ABHD4Q8TB40 342 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 CCDC120Q96HB5 630 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 ALPK1Q96QP1 1244 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 EPB41L4BQ9H329 900 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 SAMM50Q9Y512 469 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 CAPN6Q9Y6Q1 641 aa7.14□□□□□ -1.27
SCFD1-218ENST00000556256 RBAK-RBAKDNI3L0D1 243 aa7.13□□□□□ -1.27
SCFD1-218ENST00000556256 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms