RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PHKA1P46020 1223 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 CHRNDQ07001 517 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 CCDC129Q6ZRS4 1044 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 KRT27Q7Z3Y8 459 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 NBPF5PQ86XG9 351 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-235ENST00000556082 SPATA5Q8NB90 893 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 LAMB2P55268 1798 aa9.85□□□□□ -0.83
ATXN3-235ENST00000556082 DDX60Q8IY21 1712 aaKnown RBP9.85□□□□□ -0.83
ATXN3-235ENST00000556082 WDR33Q9C0J8 1336 aaKnown RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 SCN7AQ01118 1682 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 M0R2C6 588 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 CHGBP05060 677 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 GTF2E1P29083 439 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 RFC4P35249 363 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 RPS8P62241 208 aaKnown RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 EXOSC10Q01780 885 aaKnown RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 ALX1Q15699 326 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 FAM182BQ5T319 152 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 TMED8Q6PL24 325 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 DHX32Q7L7V1 743 aaKnown RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 HELBQ8NG08 1087 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 CHMP4CQ96CF2 233 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 AGXT2Q9BYV1 514 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 ANKRD2Q9GZV1 360 aa9.84□□□□□ -0.83
ATXN3-235ENST00000556082 PIH1D3Q9NQM4 214 aaKnown RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 SRP68Q9UHB9 627 aaKnown RBP9.84□□□□□ -0.83
ATXN3-235ENST00000556082 ZNF804BA4D1E1 1349 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 TCRBV5S4A2TA0A5A2 114 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 CFAP99D6REC4 459 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 FOXP2O15409 715 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 F12P00748 615 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-235ENST00000556082 CPA1P15085 419 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 TM4SF1P30408 202 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 MAP3K12Q12852 859 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 PKP1Q13835 747 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 RASGRF1Q13972 1273 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 TOB2Q14106 344 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-235ENST00000556082 ME3Q16798 604 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 WASHC4Q2M389 1173 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 SLC9C2Q5TAH2 1124 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 ZNF772Q68DY9 489 aaPredicted RBP9.83□□□□□ -0.84
ATXN3-235ENST00000556082 ARMC2Q8NEN0 867 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 FAM174AQ8TBP5 190 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 LRRC4BQ9NT99 713 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 GNL3LQ9NVN8 582 aaKnown RBP9.83□□□□□ -0.84
ATXN3-235ENST00000556082 TPCN1Q9ULQ1 816 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 MINPP1Q9UNW1 487 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 TAF6LQ9Y6J9 622 aa9.83□□□□□ -0.84
ATXN3-235ENST00000556082 ZMYM6O95789 1325 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 PDS5AQ29RF7 1337 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 WDR19Q8NEZ3 1342 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 E7EWF7 191 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 GPAA1O43292 621 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 FGAP02671 866 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 SNRPBP14678 240 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 PDE6AP16499 860 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 EVCP57679 992 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 RBM6P78332 1123 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 NFX1Q12986 1120 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 IMMTQ16891 758 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 LINC01559Q495D7 138 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 MYSM1Q5VVJ2 828 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 PI16Q6UXB8 463 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 BICDL1Q6ZP65 573 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 AMIGO3Q86WK7 504 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 LLPHQ9BRT6 129 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 PUS7LQ9H0K6 701 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 ISY1Q9ULR0 285 aaKnown RBP9.82□□□□□ -0.84
ATXN3-235ENST00000556082 SMC3Q9UQE7 1217 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 CARMIL3Q8ND23 1372 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 SBF2Q86WG5 1849 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 COL24A1Q17RW2 1714 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 ARAP2Q8WZ64 1704 aa9.82□□□□□ -0.84
ATXN3-235ENST00000556082 TERTO14746 1132 aaKnown RBP9.81□□□□□ -0.84
ATXN3-235ENST00000556082 LILRB3O75022 631 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 PDCP20941 246 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 NFIXQ14938 502 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 KLHL40Q2TBA0 621 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 STOX1Q6ZVD7 989 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 NOL8Q76FK4 1167 aaKnown RBP9.81□□□□□ -0.84
ATXN3-235ENST00000556082 CELF1Q92879 486 aaKnown RBP9.81□□□□□ -0.84
ATXN3-235ENST00000556082 STRBPQ96SI9 672 aaKnown RBP9.81□□□□□ -0.84
ATXN3-235ENST00000556082 AKAP11Q9UKA4 1901 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 ZNF532Q9HCE3 1301 aa9.81□□□□□ -0.84
ATXN3-235ENST00000556082 PLSCR1O15162 318 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 STX6O43752 255 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 PFKFB2O60825 505 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 IDH1O75874 414 aaKnown RBP9.8□□□□□ -0.84
ATXN3-235ENST00000556082 LARGE1O95461 756 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 ZSCAN22P10073 491 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-235ENST00000556082 GNAT2P19087 354 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 SYT1P21579 422 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 ST3GAL1Q11201 340 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 CAVIN4Q5BKX8 364 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 Q6ZUG5 572 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms