RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 TBC1D2Q9BYX2 928 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 AGTPBP1Q9UPW5 1226 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 FPGT-TNNI3KV9GXZ4 949 aa21.76■■□□□ 1.07
NPC2-208ENST00000556009 PPP4CP60510 307 aa21.75■■□□□ 1.07
NPC2-208ENST00000556009 HABP4Q5JVS0 413 aaKnown RBP21.75■■□□□ 1.07
NPC2-208ENST00000556009 TEX11Q8IYF3 940 aa21.75■■□□□ 1.07
NPC2-208ENST00000556009 HERC5Q9UII4 1024 aaKnown RBP21.75■■□□□ 1.07
NPC2-208ENST00000556009 NOP58Q9Y2X3 529 aaKnown RBP21.75■■□□□ 1.07
NPC2-208ENST00000556009 BAG3O95817 575 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 GJB1P08034 283 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 PRKCZQ05513 592 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 TTC39AQ5SRH9 613 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 CCDC84Q86UT8 332 aaPredicted RBP21.74■■□□□ 1.07
NPC2-208ENST00000556009 PROCA1Q8NCQ7 364 aaPredicted RBP21.74■■□□□ 1.07
NPC2-208ENST00000556009 SLAIN1Q8ND83 568 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 SHISA4Q96DD7 197 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 DBNDD2Q9BQY9 259 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 NOL10Q9BSC4 688 aaKnown RBP21.74■■□□□ 1.07
NPC2-208ENST00000556009 DHX36Q9H2U1 1008 aaKnown RBP21.74■■□□□ 1.07
NPC2-208ENST00000556009 PI4KBQ9UBF8 816 aa21.74■■□□□ 1.07
NPC2-208ENST00000556009 FAM196BA6NMK8 535 aa21.73■■□□□ 1.07
NPC2-208ENST00000556009 ZBTB7BO15156 539 aaPredicted RBP21.73■■□□□ 1.07
NPC2-208ENST00000556009 SURF6O75683 361 aaKnown RBP21.73■■□□□ 1.07
NPC2-208ENST00000556009 PLCG2P16885 1265 aa21.73■■□□□ 1.07
NPC2-208ENST00000556009 CAP2P40123 477 aa21.73■■□□□ 1.07
NPC2-208ENST00000556009 GJA8P48165 433 aa21.73■■□□□ 1.07
NPC2-208ENST00000556009 SPP2Q13103 211 aa21.73■■□□□ 1.07
NPC2-208ENST00000556009 NAA16Q6N069 864 aaPredicted RBP21.73■■□□□ 1.07
NPC2-208ENST00000556009 ZNF280CQ8ND82 737 aa21.73■■□□□ 1.07
NPC2-208ENST00000556009 SH3RF3Q8TEJ3 882 aaPredicted RBP21.73■■□□□ 1.07
NPC2-208ENST00000556009 PNMA3Q9UL41 463 aa21.73■■□□□ 1.07
NPC2-208ENST00000556009 UBXN2AP68543 259 aa21.72■■□□□ 1.07
NPC2-208ENST00000556009 OS9Q13438 667 aaPredicted RBP21.72■■□□□ 1.07
NPC2-208ENST00000556009 IRF5Q13568 498 aa21.72■■□□□ 1.07
NPC2-208ENST00000556009 SMCR8Q8TEV9 937 aaPredicted RBP21.72■■□□□ 1.07
NPC2-208ENST00000556009 SNRKQ9NRH2 765 aa21.72■■□□□ 1.07
NPC2-208ENST00000556009 GABRQQ9UN88 632 aa21.72■■□□□ 1.07
NPC2-208ENST00000556009 USP17L5A8MUK1 530 aa21.71■■□□□ 1.07
NPC2-208ENST00000556009 CYP2E1P05181 493 aaPredicted RBP21.71■■□□□ 1.07
NPC2-208ENST00000556009 CCL5P13501 91 aa21.71■■□□□ 1.07
NPC2-208ENST00000556009 RRP1BQ14684 758 aaKnown RBP21.71■■□□□ 1.07
NPC2-208ENST00000556009 METTL16Q86W50 562 aaKnown RBP21.71■■□□□ 1.07
NPC2-208ENST00000556009 PXYLP1Q8TE99 480 aa21.71■■□□□ 1.07
NPC2-208ENST00000556009 BIN2Q9UBW5 565 aaPredicted RBP21.71■■□□□ 1.07
NPC2-208ENST00000556009 CAPN2P17655 700 aa21.7■■□□□ 1.06
NPC2-208ENST00000556009 FLT3LGP49771 235 aa21.7■■□□□ 1.06
NPC2-208ENST00000556009 SH3D19Q5HYK7 790 aa21.7■■□□□ 1.06
NPC2-208ENST00000556009 TREML2Q5T2D2 321 aa21.7■■□□□ 1.06
NPC2-208ENST00000556009 FOXP4Q8IVH2 680 aaPredicted RBP21.7■■□□□ 1.06
NPC2-208ENST00000556009 FTSJ3Q8IY81 847 aaKnown RBP21.7■■□□□ 1.06
NPC2-208ENST00000556009 RNF208Q9H0X6 261 aa21.7■■□□□ 1.06
NPC2-208ENST00000556009 AATFQ9NY61 560 aaKnown RBP eCLIP21.7■■□□□ 1.06
NPC2-208ENST00000556009 TNPO2O14787 897 aaKnown RBP21.69■■□□□ 1.06
NPC2-208ENST00000556009 ADCY3O60266 1144 aa21.69■■□□□ 1.06
NPC2-208ENST00000556009 GCLCP48506 637 aaPredicted RBP21.69■■□□□ 1.06
NPC2-208ENST00000556009 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.06
NPC2-208ENST00000556009 PABPC4Q13310 644 aaKnown RBP eCLIP21.69■■□□□ 1.063e-7■■■■■ 35.2
NPC2-208ENST00000556009 FAM110CQ1W6H9 321 aa21.69■■□□□ 1.06
NPC2-208ENST00000556009 UBE2Q1Q7Z7E8 422 aa21.69■■□□□ 1.06
NPC2-208ENST00000556009 ANKRD13CQ8N6S4 541 aa21.69■■□□□ 1.06
NPC2-208ENST00000556009 WDR18Q9BV38 432 aa21.69■■□□□ 1.06
NPC2-208ENST00000556009 AS3MTQ9HBK9 375 aa21.69■■□□□ 1.06
NPC2-208ENST00000556009 PLXNB2O15031 1838 aa21.69■■□□□ 1.06
NPC2-208ENST00000556009 ALPK3Q96L96 1907 aa21.68■■□□□ 1.06
NPC2-208ENST00000556009 RLBP1P12271 317 aa21.68■■□□□ 1.06
NPC2-208ENST00000556009 ZAP70P43403 619 aa21.68■■□□□ 1.06
NPC2-208ENST00000556009 ADGRA1Q86SQ6 560 aa21.68■■□□□ 1.06
NPC2-208ENST00000556009 C1orf115Q9H7X2 142 aa21.68■■□□□ 1.06
NPC2-208ENST00000556009 GINM1Q9NU53 330 aa21.68■■□□□ 1.06
NPC2-208ENST00000556009 DBNLQ9UJU6 430 aaKnown RBP21.68■■□□□ 1.06
NPC2-208ENST00000556009 MYH1P12882 1939 aa21.67■■□□□ 1.06
NPC2-208ENST00000556009 ASNSP08243 561 aa21.67■■□□□ 1.06
NPC2-208ENST00000556009 HMGCS2P54868 508 aa21.67■■□□□ 1.06
NPC2-208ENST00000556009 ITPRIPQ8IWB1 547 aa21.67■■□□□ 1.06
NPC2-208ENST00000556009 TGFBRAP1Q8WUH2 860 aa21.67■■□□□ 1.06
NPC2-208ENST00000556009 COA7Q96BR5 231 aa21.67■■□□□ 1.06
NPC2-208ENST00000556009 TRIOBPQ9H2D6 2365 aa21.66■■□□□ 1.06
NPC2-208ENST00000556009 MAPKAPK5Q8IW41 473 aa21.66■■□□□ 1.06
NPC2-208ENST00000556009 EAF2Q96CJ1 260 aaPredicted RBP21.66■■□□□ 1.06
NPC2-208ENST00000556009 UNC93B1Q9H1C4 597 aa21.66■■□□□ 1.06
NPC2-208ENST00000556009 PIH1D3Q9NQM4 214 aaKnown RBP21.66■■□□□ 1.06
NPC2-208ENST00000556009 FLT1P17948 1338 aa21.65■■□□□ 1.06
NPC2-208ENST00000556009 H0YGN5 161 aa21.65■■□□□ 1.06
NPC2-208ENST00000556009 SGPL1O95470 568 aa21.65■■□□□ 1.06
NPC2-208ENST00000556009 TMED8Q6PL24 325 aaPredicted RBP21.65■■□□□ 1.06
NPC2-208ENST00000556009 U2AF1L4Q8WU68 220 aaKnown RBP21.65■■□□□ 1.06
NPC2-208ENST00000556009 ASCC2Q9H1I8 757 aaPredicted RBP21.65■■□□□ 1.06
NPC2-208ENST00000556009 COLQQ9Y215 455 aaPredicted RBP21.65■■□□□ 1.06
NPC2-208ENST00000556009 C19orf81C9J6K1 198 aa21.64■■□□□ 1.05
NPC2-208ENST00000556009 ELNP15502 786 aa21.64■■□□□ 1.05
NPC2-208ENST00000556009 BACE1P56817 501 aa21.64■■□□□ 1.05
NPC2-208ENST00000556009 CERS3Q8IU89 383 aa21.64■■□□□ 1.05
NPC2-208ENST00000556009 CCDC8Q9H0W5 538 aaPredicted RBP21.64■■□□□ 1.05
NPC2-208ENST00000556009 DNAJC18Q9H819 358 aa21.64■■□□□ 1.05
NPC2-208ENST00000556009 TLR7Q9NYK1 1049 aaKnown RBP21.64■■□□□ 1.05
NPC2-208ENST00000556009 PALD1Q9ULE6 856 aa21.64■■□□□ 1.05
NPC2-208ENST00000556009 INHAP05111 366 aa21.63■■□□□ 1.05
NPC2-208ENST00000556009 HOXA7P31268 230 aaPredicted RBP21.63■■□□□ 1.05
NPC2-208ENST00000556009 FXR1P51114 621 aaKnown RBP eCLIP21.63■■□□□ 1.05
NPC2-208ENST00000556009 JAG1P78504 1218 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms