RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 USP28Q96RU2 1077 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 MCM9Q9NXL9 1143 aa11.74□□□□□ -0.53
EFCAB11-209ENST00000556005 PRDM1O75626 825 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 CCDC173Q0VFZ6 552 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 CATIPQ7Z7H3 387 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 ENAHQ8N8S7 591 aaPredicted RBP11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 NUP133Q8WUM0 1156 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 MASTLQ96GX5 879 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 SLC26A6Q9BXS9 759 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 COA1Q9GZY4 146 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 NUP62CLQ9H1M0 184 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 DDX19AQ9NUU7 478 aaKnown RBP11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 RTEL1Q9NZ71 1219 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 MROH7-TTC4A0A0A0MT08 1334 aa11.73□□□□□ -0.53
EFCAB11-209ENST00000556005 SMIM22K7EJ46 135 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 POLR3DP05423 398 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 CALM1P0DP23 149 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 CALM2P0DP24 149 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 CALM3P0DP25 149 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 PLCG2P16885 1265 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 LIG1P18858 919 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 KIF23Q02241 960 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 DIXDC1Q155Q3 683 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 MFSD14BQ5SR56 506 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 KRT40Q6A162 431 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 MPNDQ8N594 471 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 SH3RF3Q8TEJ3 882 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 ZC3H12CQ9C0D7 883 aaKnown RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 DUOX1Q9NRD9 1551 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 DEXIO95424 95 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 GNL2Q13823 731 aaKnown RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 GRIK5Q16478 980 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 C12orf60Q5U649 245 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 MYSM1Q5VVJ2 828 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 CRACR2BQ8N4Y2 399 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 FAM163AQ96GL9 167 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 RTFDC1Q9BY42 306 aaPredicted RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 GJB4Q9NTQ9 266 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 POLR3EQ9NVU0 708 aa11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
EFCAB11-209ENST00000556005 FAM205AQ6ZU69 1335 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 NRXN2Q9P2S2 1712 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 BAZ2AQ9UIF9 1905 aaKnown RBP11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 TSPY2A6NKD2 308 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 YEATS4O95619 227 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 BTDP43251 543 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 ME1P48163 572 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 MAP3K11Q16584 847 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 DPP8Q6V1X1 898 aaPredicted RBP11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 KCNG4Q8TDN1 519 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 AIFM3Q96NN9 605 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 FTOQ9C0B1 505 aaKnown RBP eCLIP11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 TNMDQ9H2S6 317 aa11.71□□□□□ -0.53
EFCAB11-209ENST00000556005 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
EFCAB11-209ENST00000556005 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 DDAH1O94760 285 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 CCDC192P0DO97 292 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 CYP2D6P10635 497 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 AKAP17AQ02040 695 aaKnown RBP11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 SAFBQ15424 915 aaKnown RBP eCLIP11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 SF3A1Q15459 793 aaKnown RBP11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 RNF214Q8ND24 703 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 TGFBRAP1Q8WUH2 860 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 TRIM44Q96DX7 344 aaPredicted RBP11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 PPP1R9BQ96SB3 815 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 ZNF287Q9HBT7 754 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 SUGT1Q9Y2Z0 365 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 KIF28PB7ZC32 967 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 NR1I2O75469 434 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 U2AF2P26368 475 aaKnown RBP eCLIP11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 GTF2IP78347 998 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 STK38Q15208 465 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 CAMK4Q16566 473 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 CCDC178Q5BJE1 867 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 FAM47AQ5JRC9 791 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 CCAR1Q8IX12 1150 aaKnown RBP11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 EYA3Q99504 573 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 RNF26Q9BY78 433 aaPredicted RBP11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 CLSTN2Q9H4D0 955 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 MKNK2Q9HBH9 465 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 LRRC37AA6NMS7 1700 aa11.7□□□□□ -0.54
EFCAB11-209ENST00000556005 ANKRD31Q8N7Z5 1873 aa11.69□□□□□ -0.54
EFCAB11-209ENST00000556005 G3V3G9 751 aa11.69□□□□□ -0.54
EFCAB11-209ENST00000556005 H0YIN7 160 aa11.69□□□□□ -0.54
EFCAB11-209ENST00000556005 XBP1P17861 261 aa11.69□□□□□ -0.54
EFCAB11-209ENST00000556005 TROAPQ12815 778 aa11.69□□□□□ -0.54
EFCAB11-209ENST00000556005 SLC15A2Q16348 729 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms