RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 MARCKSP29966 332 aaPredicted RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 PIP4K2BP78356 416 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 CCZ1BP86790 482 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 CCZ1P86791 482 aaPredicted RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 SSRP1Q08945 709 aaKnown RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 NCBP1Q09161 790 aaKnown RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 ARID5BQ14865 1188 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 SART3Q15020 963 aaKnown RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 SAFBQ15424 915 aaKnown RBP eCLIP8.07□□□□□ -1.12
TDP1-213ENST00000555880 ALX1Q15699 326 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 HLFQ16534 295 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 AXDND1Q5T1B0 1012 aaPredicted RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 CYB5R4Q7L1T6 521 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 TMC6Q7Z403 805 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 CCAR2Q8N163 923 aaKnown RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 VGLL2Q8N8G2 317 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 AK7Q96M32 723 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 FEZ1Q99689 392 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 NACAP1Q9BZK3 213 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 KRT23Q9C075 422 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 XPO4Q9C0E2 1151 aaKnown RBP8.07□□□□□ -1.12
TDP1-213ENST00000555880 NBPF3Q9H094 633 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 KCND1Q9NSA2 647 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 GJB4Q9NTQ9 266 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 SLC12A7Q9Y666 1083 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 MROH7-TTC4A0A0A0MT08 1334 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 STK36Q9NRP7 1315 aa8.07□□□□□ -1.12
TDP1-213ENST00000555880 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 IFIT3O14879 490 aaKnown RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 CUTAO60888 179 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 SLC34A2O95436 690 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 TUBB4AP04350 444 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 GNAT2P19087 354 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 LIFRP42702 1097 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 PHKA1P46020 1223 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 NYAP1Q6ZVC0 841 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 SGMS1Q86VZ5 419 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 TRIM22Q8IYM9 498 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 SYNE4Q8N205 404 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 SPATA5Q8NB90 893 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 PHKBQ93100 1093 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 STRBPQ96SI9 672 aaKnown RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 DOCK2Q92608 1830 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 ERICH2A1L162 156 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 USP27XA6NNY8 438 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 PATL2C9JE40 543 aaKnown RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 WDHD1O75717 1129 aaPredicted RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 ADAMTS2O95450 1211 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 CYP19A1P11511 503 aaPredicted RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 RXRAP19793 462 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 U2AF2P26368 475 aaKnown RBP eCLIP8.06□□□□□ -1.12
TDP1-213ENST00000555880 KCNJ6P48051 423 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 MYL5Q02045 173 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 RESP18Q5W5W9 173 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 MFSD6Q6ZSS7 791 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 DZIP3Q86Y13 1208 aaKnown RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 MPHOSPH8Q99549 860 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 LY9Q9HBG7 655 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 TRMT1Q9NXH9 659 aaKnown RBP8.06□□□□□ -1.12
TDP1-213ENST00000555880 WWC3Q9ULE0 1092 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 TIAM2Q8IVF5 1701 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 LRP5O75197 1615 aa8.06□□□□□ -1.12
TDP1-213ENST00000555880 NEDD4P46934 1319 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 CCDC196A0A1B0GTZ2 297 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 TCRBV5S4A2TA0A5A2 114 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 PSDA5PKW4 1024 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 NUTM2BA6NNL0 878 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 NUTM2EB1AL46 878 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 MBD4O95243 580 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 FMNL1O95466 1100 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 SERPINC1P01008 464 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 LMOD1P29536 600 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 CDC27P30260 824 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 IL6STP40189 918 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 TDO2P48775 406 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 CBX1P83916 185 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 FANCCQ00597 558 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 NUTM2AQ8IVF1 878 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 IFNL3Q8IZI9 196 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 MAGEB6Q8N7X4 407 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 IGDCC4Q8TDY8 1250 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 AIFM3Q96NN9 605 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 NOL10Q9BSC4 688 aaKnown RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 SLC26A6Q9BXS9 759 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 TOMM22Q9NS69 142 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 TUBE1Q9UJT0 475 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 HPSEQ9Y251 543 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 BCL9O00512 1426 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 UBN2Q6ZU65 1347 aa8.05□□□□□ -1.12
TDP1-213ENST00000555880 AHDC1Q5TGY3 1603 aaPredicted RBP8.05□□□□□ -1.12
TDP1-213ENST00000555880 FAM237AA0A1B0GTK4 181 aa8.04□□□□□ -1.12
TDP1-213ENST00000555880 PTPAQ15257 358 aa8.04□□□□□ -1.12
TDP1-213ENST00000555880 AKNAD1Q5T1N1 836 aa8.04□□□□□ -1.12
TDP1-213ENST00000555880 SHC4Q6S5L8 630 aa8.04□□□□□ -1.12
TDP1-213ENST00000555880 NOSTRINQ8IVI9 506 aa8.04□□□□□ -1.12
TDP1-213ENST00000555880 TMTC2Q8N394 836 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms