RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 NAA16Q6N069 864 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 C17orf99Q6UX52 265 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 ZSCAN29Q8IWY8 852 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 TEX11Q8IYF3 940 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 EFCC1Q9HA90 598 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 IL1RAPL2Q9NP60 686 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 LRP2BPQ9P2M1 347 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 RCAN3Q9UKA8 241 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 AFG3L2Q9Y4W6 797 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 KIAA0100Q14667 2235 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 PDHXO00330 501 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 TBC1D12O60347 775 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 LDHCP07864 332 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 PPP4CP60510 307 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 JAG1P78504 1218 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 AACSQ86V21 672 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 RHPN1Q8TCX5 695 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 ARMC5Q96C12 935 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 DDX19BQ9UMR2 479 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 PTCH2Q9Y6C5 1203 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 ZHX2Q9Y6X8 837 aa11.4□□□□□ -0.58
VIPAS39-207ENST00000555854 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
VIPAS39-207ENST00000555854 CXCL11O14625 94 aa11.39□□□□□ -0.59
VIPAS39-207ENST00000555854 CYP2C8P10632 490 aa11.39□□□□□ -0.59
VIPAS39-207ENST00000555854 BCRP11274 1271 aa11.39□□□□□ -0.59
VIPAS39-207ENST00000555854 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-207ENST00000555854 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
VIPAS39-207ENST00000555854 CTNND1O60716 968 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-207ENST00000555854 METTL16Q86W50 562 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-207ENST00000555854 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
VIPAS39-207ENST00000555854 MIGA1Q8NAN2 632 aa11.38□□□□□ -0.59
VIPAS39-207ENST00000555854 TGFBRAP1Q8WUH2 860 aa11.38□□□□□ -0.59
VIPAS39-207ENST00000555854 ZNF333Q96JL9 665 aa11.38□□□□□ -0.59
VIPAS39-207ENST00000555854 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
VIPAS39-207ENST00000555854 TRIM75PA6NK02 468 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 APBB1O00213 710 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 IDH1O75874 414 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 CYP7A1P22680 504 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 TREML2Q5T2D2 321 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 RPAP2Q8IXW5 612 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 MAGEB6Q8N7X4 407 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 EDC3Q96F86 508 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 RIOK1Q9BRS2 568 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 PICK1Q9NRD5 415 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 MYH1P12882 1939 aa11.37□□□□□ -0.59
VIPAS39-207ENST00000555854 MGAMO43451 1857 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 IGSF3O75054 1194 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 MS4A1P11836 297 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 CAP2P40123 477 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 EVX2Q03828 476 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 SLC4A8Q2Y0W8 1093 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 GADL1Q6ZQY3 521 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 PARK7Q99497 189 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 SAP30BPQ9UHR5 308 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 HERC5Q9UII4 1024 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 PALD1Q9ULE6 856 aa11.36□□□□□ -0.59
VIPAS39-207ENST00000555854 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 GDF11O95390 407 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 BAG3O95817 575 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 CHGBP05060 677 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 PDE6AP16499 860 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 OSBPP22059 807 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 PDE3AQ14432 1141 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 SLFNL1Q499Z3 407 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 HSP90AB4PQ58FF6 505 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 SH3TC2Q8TF17 1288 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 PI4KBQ9UBF8 816 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 AGTPBP1Q9UPW5 1226 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 SLC45A1Q9Y2W3 748 aa11.35□□□□□ -0.59
VIPAS39-207ENST00000555854 HAX1O00165 279 aa11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 PLCG2P16885 1265 aa11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 PSMC4P43686 418 aa11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 HMGCS2P54868 508 aa11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 SPP2Q13103 211 aa11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 FASTKD5Q7L8L6 764 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 CLASRPQ8N2M8 674 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 ZNF280CQ8ND82 737 aa11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 DHX36Q9H2U1 1008 aaKnown RBP11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
VIPAS39-207ENST00000555854 GOLIM4O00461 696 aa11.33□□□□□ -0.6
VIPAS39-207ENST00000555854 HMMRO75330 724 aa11.33□□□□□ -0.6
VIPAS39-207ENST00000555854 PRKCZQ05513 592 aa11.33□□□□□ -0.6
VIPAS39-207ENST00000555854 SLC9C1Q4G0N8 1177 aa11.33□□□□□ -0.6
VIPAS39-207ENST00000555854 SH3D19Q5HYK7 790 aa11.33□□□□□ -0.6
VIPAS39-207ENST00000555854 PROCA1Q8NCQ7 364 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-207ENST00000555854 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-207ENST00000555854 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms