RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 KLHDC4Q8TBB5 520 aa17.9■□□□□ 0.46
TUBB3-210ENST00000555810 KAZALD1Q96I82 304 aa17.9■□□□□ 0.46
TUBB3-210ENST00000555810 NUDT12Q9BQG2 462 aa17.9■□□□□ 0.46
TUBB3-210ENST00000555810 ASCC2Q9H1I8 757 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-210ENST00000555810 TTYH1Q9H313 450 aaPredicted RBP17.9■□□□□ 0.46
TUBB3-210ENST00000555810 FRMPD3Q5JV73 1810 aa17.89■□□□□ 0.45
TUBB3-210ENST00000555810 LDHBP07195 334 aaKnown RBP17.89■□□□□ 0.45
TUBB3-210ENST00000555810 ZKSCAN1P17029 563 aaPredicted RBP17.89■□□□□ 0.45
TUBB3-210ENST00000555810 PICALMQ13492 652 aa17.89■□□□□ 0.45
TUBB3-210ENST00000555810 C9orf50Q5SZB4 431 aa17.89■□□□□ 0.45
TUBB3-210ENST00000555810 MUC3AQ02505 3323 aa17.89■□□□□ 0.45
TUBB3-210ENST00000555810 MAST2Q6P0Q8 1798 aa17.89■□□□□ 0.45
TUBB3-210ENST00000555810 TMEM265A0A087WTH1 108 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 FAM196BA6NMK8 535 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 ENTPD3O75355 529 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 ALDH1L1O75891 902 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 PABPC4Q13310 644 aaKnown RBP eCLIP17.88■□□□□ 0.45
TUBB3-210ENST00000555810 CCL14Q16627 93 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 TJAP1Q5JTD0 557 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 WDR63Q8IWG1 891 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 FAM122AQ96E09 287 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 BICC1Q9H694 974 aaKnown RBP17.88■□□□□ 0.45
TUBB3-210ENST00000555810 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 LOC285556D6RIA3 1793 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 LTBP2Q14767 1821 aa17.88■□□□□ 0.45
TUBB3-210ENST00000555810 ATAD5Q96QE3 1844 aa17.87■□□□□ 0.45
TUBB3-210ENST00000555810 VAMP4O75379 141 aa17.87■□□□□ 0.45
TUBB3-210ENST00000555810 NBPF7P0C2Y1 421 aaPredicted RBP17.87■□□□□ 0.45
TUBB3-210ENST00000555810 MAP3K10Q02779 954 aa17.87■□□□□ 0.45
TUBB3-210ENST00000555810 PUM3Q15397 648 aaKnown RBP17.87■□□□□ 0.45
TUBB3-210ENST00000555810 IDI2Q9BXS1 227 aa17.87■□□□□ 0.45
TUBB3-210ENST00000555810 FGFR2P21802 821 aa17.86■□□□□ 0.45
TUBB3-210ENST00000555810 PLA2G5P39877 138 aa17.86■□□□□ 0.45
TUBB3-210ENST00000555810 PDE3AQ14432 1141 aa17.86■□□□□ 0.45
TUBB3-210ENST00000555810 ZNF280CQ8ND82 737 aa17.86■□□□□ 0.45
TUBB3-210ENST00000555810 SRCIN1Q9C0H9 1055 aa17.86■□□□□ 0.45
TUBB3-210ENST00000555810 DDX4Q9NQI0 724 aaKnown RBP17.86■□□□□ 0.45
TUBB3-210ENST00000555810 XRCC5P13010 732 aaKnown RBP17.85■□□□□ 0.45
TUBB3-210ENST00000555810 SLC5A1P13866 664 aa17.85■□□□□ 0.45
TUBB3-210ENST00000555810 RTP1P59025 263 aa17.85■□□□□ 0.45
TUBB3-210ENST00000555810 CCAR1Q8IX12 1150 aaKnown RBP17.85■□□□□ 0.45
TUBB3-210ENST00000555810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.85■□□□□ 0.453e-6■■■■■ 29.3
TUBB3-210ENST00000555810 PRDM5Q9NQX1 630 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-210ENST00000555810 MORF4L1Q9UBU8 362 aa17.85■□□□□ 0.45
TUBB3-210ENST00000555810 ATP11BQ9Y2G3 1177 aa17.85■□□□□ 0.45
TUBB3-210ENST00000555810 IRX3P78415 501 aaPredicted RBP17.84■□□□□ 0.45
TUBB3-210ENST00000555810 RABL6Q3YEC7 729 aaPredicted RBP17.84■□□□□ 0.45
TUBB3-210ENST00000555810 TRMT44Q8IYL2 757 aaKnown RBP17.84■□□□□ 0.45
TUBB3-210ENST00000555810 USP38Q8NB14 1042 aa17.84■□□□□ 0.45
TUBB3-210ENST00000555810 SOCS4Q8WXH5 440 aa17.84■□□□□ 0.45
TUBB3-210ENST00000555810 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
TUBB3-210ENST00000555810 UTYO14607 1347 aa17.83■□□□□ 0.44
TUBB3-210ENST00000555810 CNGA1P29973 690 aa17.83■□□□□ 0.44
TUBB3-210ENST00000555810 EXOSC9Q06265 439 aaKnown RBP17.83■□□□□ 0.44
TUBB3-210ENST00000555810 GPRC5AQ8NFJ5 357 aa17.83■□□□□ 0.44
TUBB3-210ENST00000555810 BADQ92934 168 aa17.83■□□□□ 0.44
TUBB3-210ENST00000555810 TXNRD2Q9NNW7 524 aa17.83■□□□□ 0.44
TUBB3-210ENST00000555810 RFX7Q2KHR2 1363 aa17.82■□□□□ 0.44
TUBB3-210ENST00000555810 RGS2P41220 211 aa17.82■□□□□ 0.44
TUBB3-210ENST00000555810 SMAD3P84022 425 aaKnown RBP17.82■□□□□ 0.44
TUBB3-210ENST00000555810 ANKRD44Q8N8A2 993 aa17.82■□□□□ 0.44
TUBB3-210ENST00000555810 PPM1EQ8WY54 764 aa17.82■□□□□ 0.44
TUBB3-210ENST00000555810 LPIN2Q92539 896 aa17.82■□□□□ 0.44
TUBB3-210ENST00000555810 CWC22Q9HCG8 908 aaKnown RBP17.82■□□□□ 0.44
TUBB3-210ENST00000555810 Q3C1V9 767 aa17.81■□□□□ 0.44
TUBB3-210ENST00000555810 PAGR1Q9BTK6 254 aa17.81■□□□□ 0.44
TUBB3-210ENST00000555810 OSBPL5Q9H0X9 879 aaPredicted RBP17.81■□□□□ 0.44
TUBB3-210ENST00000555810 PORCNQ9H237 461 aa17.81■□□□□ 0.44
TUBB3-210ENST00000555810 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
TUBB3-210ENST00000555810 USP17L5A8MUK1 530 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 MAPK4P31152 587 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 BTDP43251 543 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 HERVK_113P62684 666 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 GPR142Q7Z601 462 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 DZIP1Q86YF9 867 aaKnown RBP17.8■□□□□ 0.44
TUBB3-210ENST00000555810 FAM9BQ8IZU0 186 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 USP6NLQ92738 828 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 GNL3LQ9NVN8 582 aaKnown RBP17.8■□□□□ 0.44
TUBB3-210ENST00000555810 NDUFB9Q9Y6M9 179 aa17.8■□□□□ 0.44
TUBB3-210ENST00000555810 RLFQ13129 1914 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 TBC1D12O60347 775 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 MTMR2Q13614 643 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 RRP1BQ14684 758 aaKnown RBP17.79■□□□□ 0.44
TUBB3-210ENST00000555810 GRIN2CQ14957 1233 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 SH3D19Q5HYK7 790 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 PLEKHH3Q7Z736 793 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 APBA2Q99767 749 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 TMOD4Q9NZQ9 345 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 RBPJLQ9UBG7 517 aa17.79■□□□□ 0.44
TUBB3-210ENST00000555810 GAKO14976 1311 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 SALL1Q9NSC2 1324 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 MYCNP04198 464 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-210ENST00000555810 CAP2P40123 477 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 MAP3K12Q12852 859 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 MORN1Q5T089 497 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 GJC2Q5T442 439 aaPredicted RBP17.78■□□□□ 0.44
TUBB3-210ENST00000555810 AS3MTQ9HBK9 375 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 FLRT1Q9NZU1 646 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 ABCF2Q9UG63 623 aa17.78■□□□□ 0.44
TUBB3-210ENST00000555810 DDX20Q9UHI6 824 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms