RNA–Protein interactions for RNA: ENST00000555808.1

TIMELESS-204, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-204ENST00000555808 DIXDC1Q155Q3 683 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 LRRC24Q50LG9 513 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 TREML2Q5T2D2 321 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 ZFPM1Q8IX07 1006 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 VGLL2Q8N8G2 317 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 MAFAQ8NHW3 353 aaPredicted RBP9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 WDR66Q8TBY9 1149 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 TRIB2Q92519 343 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 SUCLG2Q96I99 432 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 USP40Q9NVE5 1235 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 GJD2Q9UKL4 321 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 LRRFIP2Q9Y608 721 aaKnown RBP9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 CDH23Q9H251 3354 aa9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 MYO5AQ9Y4I1 1855 aaKnown RBP9.45□□□□□ -0.9
TIMELESS-204ENST00000555808 CYP2B6P20813 491 aa9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 COL9A1P20849 921 aa9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 GCLCP48506 637 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 RGS3P49796 1198 aa9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 LRRC26Q2I0M4 334 aa9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 CCDC84Q86UT8 332 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 ZSCAN29Q8IWY8 852 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 PROCA1Q8NCQ7 364 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 SYMPKQ92797 1274 aaKnown RBP9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 KAZALD1Q96I82 304 aa9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 CDX2Q99626 313 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 KIF16BQ96L93 1317 aa9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 MYH1P12882 1939 aa9.44□□□□□ -0.9
TIMELESS-204ENST00000555808 RFX7Q2KHR2 1363 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 CTNND1O60716 968 aaKnown RBP9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 ENTPD3O75355 529 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 ALDH1L1O75891 902 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 IFIT1P09914 478 aaKnown RBP9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 SLURP2P0DP57 97 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 PRKAR2AP13861 404 aaKnown RBP9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 PRDX5P30044 214 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 PABPC4Q13310 644 aaKnown RBP eCLIP9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 MAP3K21Q5TCX8 1036 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 SH3BP5LQ7L8J4 393 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 MYLIPQ8WY64 445 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 LBHD1Q9BQE6 289 aaPredicted RBP9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 SMC4Q9NTJ3 1288 aa9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 NOB1Q9ULX3 412 aaKnown RBP9.43□□□□□ -0.9
TIMELESS-204ENST00000555808 HAX1O00165 279 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 FGFR2P21802 821 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 MAP3K10Q02779 954 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 PUM3Q15397 648 aaKnown RBP9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 SLC4A10Q6U841 1118 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 IDI2Q9BXS1 227 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 SRCIN1Q9C0H9 1055 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 BICC1Q9H694 974 aaKnown RBP9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 MYH8P13535 1937 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 MUC3AQ02505 3323 aa9.42□□□□□ -0.9
TIMELESS-204ENST00000555808 TCF20Q9UGU0 1960 aaKnown RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 DDTLA6NHG4 134 aaPredicted RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 NBPF7P0C2Y1 421 aaPredicted RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 SLC5A1P13866 664 aa9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 CCND3P30281 292 aaPredicted RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 CACNB2Q08289 660 aaPredicted RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 RABL6Q3YEC7 729 aaPredicted RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 LHX8Q68G74 356 aa9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 TRMT44Q8IYL2 757 aaKnown RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 KLHDC4Q8TBB5 520 aa9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 ASCC2Q9H1I8 757 aaPredicted RBP9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 SEMA6BQ9H3T3 888 aa9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 MORF4L1Q9UBU8 362 aa9.41□□□□□ -0.9
TIMELESS-204ENST00000555808 ZNF236Q9UL36 1845 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 UTYO14607 1347 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 PTPRCP08575 1304 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 SMCHD1A6NHR9 2005 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 RLBP1P12271 317 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 XRCC5P13010 732 aaKnown RBP9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 TRIM27P14373 513 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 FOSL2P15408 326 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 ZKSCAN1P17029 563 aaPredicted RBP9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 HMGCS2P54868 508 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 SPP2Q13103 211 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 PICALMQ13492 652 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 SOCS4Q8WXH5 440 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 PRKAG2Q9UGJ0 569 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 RCAN3Q9UKA8 241 aa9.4□□□□□ -0.9
TIMELESS-204ENST00000555808 GAKO14976 1311 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 SALL1Q9NSC2 1324 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 TNFRSF10AO00220 468 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 SHHQ15465 462 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 ANKRD44Q8N8A2 993 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 LPIN2Q92539 896 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 TBC1D2Q9BYX2 928 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 SENP6Q9GZR1 1112 aaPredicted RBP9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 OSBPL5Q9H0X9 879 aaPredicted RBP9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 DDX4Q9NQI0 724 aaKnown RBP9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 RAPGEFL1Q9UHV5 662 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 COL11A1P12107 1806 aaPredicted RBP9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 PARP14Q460N5 1801 aa9.39□□□□□ -0.91
TIMELESS-204ENST00000555808 TBC1D12O60347 775 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms