RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 MCCP23508 829 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 PRELPP51888 382 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 GTF2IP78347 998 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 PTH1RQ03431 593 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 KIAA1211Q6ZU35 1233 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 ABCF2Q9UG63 623 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 GPR75-ASB3A0A0A6YYF3 556 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 MBD4O95243 580 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 HSPD1P10809 573 aaKnown RBP9.31□□□□□ -0.92
PCNX4-210ENST00000555740 FOSBP53539 338 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 NECTIN1Q15223 517 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 TTLL5Q6EMB2 1281 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 HHIPL2Q6UWX4 724 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 KIF2CQ99661 725 aa9.31□□□□□ -0.92
PCNX4-210ENST00000555740 ZC3H4Q9UPT8 1303 aaKnown RBP9.3□□□□□ -0.92
PCNX4-210ENST00000555740 ROBO3Q96MS0 1386 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 MAGEB6P1A0A0J9YX57 407 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 FZD9O00144 591 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 RASSF7Q02833 373 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 RSBN1LQ6PCB5 846 aaPredicted RBP9.3□□□□□ -0.92
PCNX4-210ENST00000555740 LCORLQ8N3X6 602 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 AGBL3Q8NEM8 1001 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 RBM8AQ9Y5S9 174 aaKnown RBP9.3□□□□□ -0.92
PCNX4-210ENST00000555740 GREB1LQ9C091 1923 aaPredicted RBP9.3□□□□□ -0.92
PCNX4-210ENST00000555740 NDUFV2P19404 249 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 RPS12P25398 132 aaKnown RBP9.3□□□□□ -0.92
PCNX4-210ENST00000555740 SPIRE2Q8WWL2 714 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 AIDAQ96BJ3 306 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 CCDC97Q96F63 343 aaPredicted RBP9.3□□□□□ -0.92
PCNX4-210ENST00000555740 SERPINA10Q9UK55 444 aa9.3□□□□□ -0.92
PCNX4-210ENST00000555740 WDR90Q96KV7 1748 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 SPDYE5A6NIY4 337 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.92
PCNX4-210ENST00000555740 LMNB1P20700 586 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 IRF5Q13568 498 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 ZDHHC15Q96MV8 337 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 EPB41L4AQ9HCS5 686 aaPredicted RBP9.29□□□□□ -0.92
PCNX4-210ENST00000555740 DAGLAQ9Y4D2 1042 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 MYH8P13535 1937 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 MOXD2PA6NHM9 499 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 SLC27A2O14975 620 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 COL9A1P20849 921 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 VPS53Q5VIR6 699 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 TM6SF1Q9BZW5 370 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 CTNNA3Q9UI47 895 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 JAG2Q9Y219 1238 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 RBM19Q9Y4C8 960 aaKnown RBP9.29□□□□□ -0.92
PCNX4-210ENST00000555740 SCN4AP35499 1836 aa9.29□□□□□ -0.92
PCNX4-210ENST00000555740 GSG1L2A8MUP6 293 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
PCNX4-210ENST00000555740 PSMD14O00487 310 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 RHBDL3P58872 404 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 RABEP1Q15276 862 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 ZBED3Q96IU2 234 aaPredicted RBP9.28□□□□□ -0.92
PCNX4-210ENST00000555740 ARMT1Q9H993 441 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 KCNQ5Q9NR82 932 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 MKRN1Q9UHC7 482 aaKnown RBP9.28□□□□□ -0.92
PCNX4-210ENST00000555740 BAG3O95817 575 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 ABL2P42684 1182 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 NT5C2P49902 561 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 ZNF280AP59817 542 aaPredicted RBP9.28□□□□□ -0.92
PCNX4-210ENST00000555740 TNIP1Q15025 636 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 RNF20Q5VTR2 975 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 CIAPIN1Q6FI81 312 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 JDP2Q8WYK2 163 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 CRNKL1Q9BZJ0 848 aaKnown RBP9.28□□□□□ -0.92
PCNX4-210ENST00000555740 ATP8A2Q9NTI2 1148 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 ANAPC4Q9UJX5 808 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 PALD1Q9ULE6 856 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 TTF2Q9UNY4 1162 aaKnown RBP9.28□□□□□ -0.92
PCNX4-210ENST00000555740 SNX14Q9Y5W7 946 aa9.28□□□□□ -0.92
PCNX4-210ENST00000555740 SMAPO00193 183 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 OATP04181 439 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 BTDP43251 543 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 CXCL9Q07325 125 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 KRT32Q14532 448 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 DIXDC1Q155Q3 683 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 HLA-CQ95604 372 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 TEKT1Q969V4 418 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 WDR19Q8NEZ3 1342 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 CRKP46108 304 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 DYNLL1P63167 89 aaKnown RBP9.27□□□□□ -0.93
PCNX4-210ENST00000555740 SBK1Q52WX2 424 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 KCTD17Q8N5Z5 321 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 MIGA1Q8NAN2 632 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 TTC13Q8NBP0 860 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 NOL10Q9BSC4 688 aaKnown RBP9.27□□□□□ -0.93
PCNX4-210ENST00000555740 MXD3Q9BW11 206 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 NACAP1Q9BZK3 213 aa9.27□□□□□ -0.93
PCNX4-210ENST00000555740 PAPPA2Q9BXP8 1791 aa9.26□□□□□ -0.93
PCNX4-210ENST00000555740 ZNF541Q9H0D2 1346 aa9.26□□□□□ -0.93
PCNX4-210ENST00000555740 APOBEC3HQ6NTF7 200 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms