RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 MEGF6O75095 1541 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 SMIM22K7EJ46 135 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 TRIM66O15016 1216 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
RCCD1-204ENST00000555737 RBL2Q08999 1139 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 LONRF2Q1L5Z9 754 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 MAGEB6Q8N7X4 407 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 GOLGA1Q92805 767 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 HPSEQ9Y251 543 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 CUTAO60888 179 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 MBD4O95243 580 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 ZFYP08048 801 aaPredicted RBP20.27■□□□□ 0.84
RCCD1-204ENST00000555737 ITGA6P23229 1130 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 PAXIP1Q6ZW49 1069 aaPredicted RBP20.27■□□□□ 0.84
RCCD1-204ENST00000555737 NOSTRINQ8IVI9 506 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 BLZF1Q9H2G9 400 aa20.27■□□□□ 0.84
RCCD1-204ENST00000555737 H3BQF6 201 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 CHMP4BP1P59074 171 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
RCCD1-204ENST00000555737 CSRNP2Q9H175 543 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
RCCD1-204ENST00000555737 GPS2Q13227 327 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 MPHOSPH8Q99549 860 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 VPS16Q9H269 839 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 HOOK1Q9UJC3 728 aaKnown RBP20.26■□□□□ 0.83
RCCD1-204ENST00000555737 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 ZSCAN26Q16670 478 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 RAD9BQ6WBX8 426 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 SRRTQ9BXP5 876 aaKnown RBP20.26■□□□□ 0.83
RCCD1-204ENST00000555737 TFR2Q9UP52 801 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 TBC1D2BQ9UPU7 963 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 MRFAP1Q9Y605 127 aa20.26■□□□□ 0.83
RCCD1-204ENST00000555737 CCDC175P0C221 793 aa20.25■□□□□ 0.83
RCCD1-204ENST00000555737 TOB1P50616 345 aaPredicted RBP20.25■□□□□ 0.83
RCCD1-204ENST00000555737 RFX7Q2KHR2 1363 aa20.25■□□□□ 0.83
RCCD1-204ENST00000555737 AKR1B15C9JRZ8 316 aaPredicted RBP20.25■□□□□ 0.83
RCCD1-204ENST00000555737 CASP14P31944 242 aa20.25■□□□□ 0.83
RCCD1-204ENST00000555737 MAP3K9P80192 1104 aa20.25■□□□□ 0.83
RCCD1-204ENST00000555737 JAKMIP3Q5VZ66 844 aa20.25■□□□□ 0.83
RCCD1-204ENST00000555737 VPS54Q9P1Q0 977 aa20.25■□□□□ 0.83
RCCD1-204ENST00000555737 LCMT1Q9UIC8 334 aa20.25■□□□□ 0.83
RCCD1-204ENST00000555737 PPP6R2O75170 966 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 TRIM22Q8IYM9 498 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 GPR161Q8N6U8 529 aaKnown RBP20.24■□□□□ 0.83
RCCD1-204ENST00000555737 KIF5CO60282 957 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 PDE6AP16499 860 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 MED15Q96RN5 788 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 ADAM21Q9UKJ8 722 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 RABEP2Q9H5N1 569 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 LY9Q9HBG7 655 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 KCND1Q9NSA2 647 aa20.24■□□□□ 0.83
RCCD1-204ENST00000555737 ADD2P35612 726 aa20.23■□□□□ 0.83
RCCD1-204ENST00000555737 FAM193AP78312 1265 aa20.23■□□□□ 0.83
RCCD1-204ENST00000555737 AKAP17AQ02040 695 aaKnown RBP20.23■□□□□ 0.83
RCCD1-204ENST00000555737 RGS22Q8NE09 1264 aa20.23■□□□□ 0.83
RCCD1-204ENST00000555737 GPR108Q9NPR9 543 aa20.23■□□□□ 0.83
RCCD1-204ENST00000555737 FAM217BQ9NTX9 383 aaPredicted RBP20.23■□□□□ 0.83
RCCD1-204ENST00000555737 STX10O60499 249 aa20.23■□□□□ 0.83
RCCD1-204ENST00000555737 ZNF174Q15697 407 aa20.23■□□□□ 0.83
RCCD1-204ENST00000555737 CERS3Q8IU89 383 aa20.23■□□□□ 0.83
RCCD1-204ENST00000555737 MARF1Q9Y4F3 1742 aaKnown RBP20.23■□□□□ 0.83
RCCD1-204ENST00000555737 ENC1O14682 589 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 ZMYND10O75800 440 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 HLFQ16534 295 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 RTN1Q16799 776 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 NOM1Q5C9Z4 860 aaKnown RBP20.22■□□□□ 0.83
RCCD1-204ENST00000555737 NUTM2AQ8IVF1 878 aaPredicted RBP20.22■□□□□ 0.83
RCCD1-204ENST00000555737 DNAJC10Q8IXB1 793 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 SLC35F6Q8N357 371 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 IGDCC4Q8TDY8 1250 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 PNKPQ96T60 521 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 FUT8Q9BYC5 575 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 NUP88Q99567 741 aaPredicted RBP20.22■□□□□ 0.83
RCCD1-204ENST00000555737 SLF1Q9BQI6 1058 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 ABCF2Q9UG63 623 aa20.22■□□□□ 0.83
RCCD1-204ENST00000555737 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
RCCD1-204ENST00000555737 ERICH2A1L162 156 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 TPM1P09493 284 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 CAPZA3Q96KX2 299 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 CTNND2Q9UQB3 1225 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 LAMA4Q16363 1823 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 CD44P16070 742 aaKnown RBP20.21■□□□□ 0.83
RCCD1-204ENST00000555737 WTAPQ15007 396 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 NTRK3Q16288 839 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 FKBP15Q5T1M5 1219 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 NCAPH2Q6IBW4 605 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 KIF6Q6ZMV9 814 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 PLIN2Q99541 437 aa20.21■□□□□ 0.83
RCCD1-204ENST00000555737 TXLNAP40222 546 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 ZCRB1Q8TBF4 217 aaKnown RBP20.2■□□□□ 0.82
RCCD1-204ENST00000555737 ABCB6Q9NP58 842 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 PRDM11Q9NQV5 511 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 TRIM10Q9UDY6 481 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 GUCA1BQ9UMX6 200 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 ATF3P18847 181 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 IFNL3Q8IZI9 196 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 TXLNBQ8N3L3 684 aa20.2■□□□□ 0.82
RCCD1-204ENST00000555737 TAB2Q9NYJ8 693 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms