RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 EPS15P42566 896 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 FGD1P98174 961 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 SH3BP5LQ7L8J4 393 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
SRP54-208ENST00000555557 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 BRF1Q92994 677 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 ZBED3Q96IU2 234 aaPredicted RBP12.05□□□□□ -0.48
SRP54-208ENST00000555557 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 KRT23Q9C075 422 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 CNNM2Q9H8M5 875 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
SRP54-208ENST00000555557 RANBP6O60518 1105 aaKnown RBP12.05□□□□□ -0.48
SRP54-208ENST00000555557 SLC3A2P08195 630 aaKnown RBP12.05□□□□□ -0.48
SRP54-208ENST00000555557 FGRP09769 529 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
SRP54-208ENST00000555557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
SRP54-208ENST00000555557 H7C1D1 291 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 MYO1BO43795 1136 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 MCM2P49736 904 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 PDE4BQ07343 736 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 ALDH8A1Q9H2A2 487 aaPredicted RBP12.04□□□□□ -0.48
SRP54-208ENST00000555557 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 SENP2Q9HC62 589 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 GPRC5DQ9NZD1 345 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 TMOD2Q9NZR1 351 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 CDK5RAP2Q96SN8 1893 aa12.04□□□□□ -0.48
SRP54-208ENST00000555557 DTNBO60941 627 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 CDK8P49336 464 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 ME3Q16798 604 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 KIF4BQ2VIQ3 1234 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 TTC6Q86TZ1 520 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 TRPM4Q8TD43 1214 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 ESR2Q92731 530 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 LAMA4Q16363 1823 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
SRP54-208ENST00000555557 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 FAM196BA6NMK8 535 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 ORC4O43929 436 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 NMT2O60551 498 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 PRKCSHP14314 528 aaPredicted RBP12.03□□□□□ -0.48
SRP54-208ENST00000555557 STK3Q13188 491 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 ANKRD1Q15327 319 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 C16orf86Q6ZW13 317 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 IGDCC4Q8TDY8 1250 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 NAV1Q8NEY1 1877 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 ROBO3Q96MS0 1386 aa12.03□□□□□ -0.48
SRP54-208ENST00000555557 IFIT3O14879 490 aaKnown RBP12.02□□□□□ -0.49
SRP54-208ENST00000555557 ENTPD3O75355 529 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
SRP54-208ENST00000555557 HLA-DOAP06340 250 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 HSP90AA1P07900 732 aaKnown RBP12.02□□□□□ -0.49
SRP54-208ENST00000555557 PCP11498 1178 aaKnown RBP12.02□□□□□ -0.49
SRP54-208ENST00000555557 MMP14P50281 582 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 TFAP4Q01664 338 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 GABPAQ06546 454 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 AGXT2Q9BYV1 514 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 SERPINB13Q9UIV8 391 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
SRP54-208ENST00000555557 CNTNAP1P78357 1384 aa12.02□□□□□ -0.49
SRP54-208ENST00000555557 TSPY2A6NKD2 308 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 SH2B2O14492 632 aaPredicted RBP12.01□□□□□ -0.49
SRP54-208ENST00000555557 RASA1P20936 1047 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 HIRAP54198 1017 aaPredicted RBP12.01□□□□□ -0.49
SRP54-208ENST00000555557 TMEM67Q5HYA8 995 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 RAB11FIP4Q86YS3 637 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 ZNF444Q8N0Y2 327 aaPredicted RBP12.01□□□□□ -0.49
SRP54-208ENST00000555557 IL27Q8NEV9 243 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 SLKQ9H2G2 1235 aaPredicted RBP12.01□□□□□ -0.49
SRP54-208ENST00000555557 DHX36Q9H2U1 1008 aaKnown RBP12.01□□□□□ -0.49
SRP54-208ENST00000555557 PI4KBQ9UBF8 816 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 HACL1Q9UJ83 578 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 BRPF3Q9ULD4 1205 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 DDX60LQ5H9U9 1706 aaKnown RBP12.01□□□□□ -0.49
SRP54-208ENST00000555557 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 CCDC83Q8IWF9 413 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 FAM151AQ8WW52 585 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 CSRNP1Q96S65 589 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 UBAC1Q9BSL1 405 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 DNAJC18Q9H819 358 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
SRP54-208ENST00000555557 WDR19Q8NEZ3 1342 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 MYH1P12882 1939 aa12.01□□□□□ -0.49
SRP54-208ENST00000555557 FOCADQ5VW36 1801 aa12□□□□□ -0.49
SRP54-208ENST00000555557 ECM29Q5VYK3 1845 aa12□□□□□ -0.49
SRP54-208ENST00000555557 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
SRP54-208ENST00000555557 RASA3Q14644 834 aa12□□□□□ -0.49
SRP54-208ENST00000555557 FBXL16Q8N461 479 aa12□□□□□ -0.49
SRP54-208ENST00000555557 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
SRP54-208ENST00000555557 TMEM87BQ96K49 555 aa12□□□□□ -0.49
SRP54-208ENST00000555557 ZSCAN10Q96SZ4 725 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms