RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 NOL9Q5SY16 702 aaKnown RBP14.59□□□□□ -0.07
SRP54-206ENST00000555317 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 SCYL3Q8IZE3 742 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 KBTBD3Q8NAB2 608 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 RIOK1Q9BRS2 568 aaKnown RBP14.59□□□□□ -0.07
SRP54-206ENST00000555317 FSD1Q9BTV5 496 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 LAMB1P07942 1786 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 CCL15-CCL14A0A0B4J2E2 113 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 FAM196BA6NMK8 535 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 IGHDP01880 384 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 POLR3DP05423 398 aaPredicted RBP14.58□□□□□ -0.08
SRP54-206ENST00000555317 ZFYP08048 801 aaPredicted RBP14.58□□□□□ -0.08
SRP54-206ENST00000555317 CETPP11597 493 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 CCL15Q16663 113 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 SLC4A8Q2Y0W8 1093 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 TTC6Q86TZ1 520 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 IFNL1Q8IU54 200 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 AMOTL1Q8IY63 956 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 PI4K2BQ8TCG2 481 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 CASP8AP2Q9UKL3 1982 aa14.58□□□□□ -0.08
SRP54-206ENST00000555317 PHF20L1A8MW92 1017 aa14.57□□□□□ -0.08
SRP54-206ENST00000555317 RNF113AO15541 343 aaKnown RBP14.57□□□□□ -0.08
SRP54-206ENST00000555317 MAP3K10Q02779 954 aa14.57□□□□□ -0.08
SRP54-206ENST00000555317 CHD1LQ86WJ1 897 aa14.57□□□□□ -0.08
SRP54-206ENST00000555317 FOXP4Q8IVH2 680 aaPredicted RBP14.57□□□□□ -0.08
SRP54-206ENST00000555317 LCORLQ8N3X6 602 aa14.57□□□□□ -0.08
SRP54-206ENST00000555317 ARMT1Q9H993 441 aa14.57□□□□□ -0.08
SRP54-206ENST00000555317 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
SRP54-206ENST00000555317 IRF6O14896 467 aa14.56□□□□□ -0.08
SRP54-206ENST00000555317 PDE1AP54750 535 aa14.56□□□□□ -0.08
SRP54-206ENST00000555317 NUCB1Q02818 461 aa14.56□□□□□ -0.08
SRP54-206ENST00000555317 COL13A1Q5TAT6 717 aaPredicted RBP14.56□□□□□ -0.08
SRP54-206ENST00000555317 MCM9Q9NXL9 1143 aa14.56□□□□□ -0.08
SRP54-206ENST00000555317 TBC1D8O95759 1140 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 PTPRAP18433 802 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 SLFNL1Q499Z3 407 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 APPBP2Q92624 585 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 ATP8A2Q9NTI2 1148 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 STAP2Q9UGK3 403 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 SERPINB13Q9UIV8 391 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 SLC4A4Q9Y6R1 1079 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 ZHX2Q9Y6X8 837 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 SALL3Q9BXA9 1300 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 SIPA1L1O43166 1804 aa14.55□□□□□ -0.08
SRP54-206ENST00000555317 BAZ2AQ9UIF9 1905 aaKnown RBP14.54□□□□□ -0.08
SRP54-206ENST00000555317 TESPA1A2RU30 521 aaPredicted RBP14.54□□□□□ -0.08
SRP54-206ENST00000555317 TRIM6-TRIM34B2RNG4 842 aa14.54□□□□□ -0.08
SRP54-206ENST00000555317 IGF2BP3O00425 579 aaKnown RBP eCLIP14.54□□□□□ -0.08
SRP54-206ENST00000555317 SLURP2P0DP57 97 aa14.54□□□□□ -0.08
SRP54-206ENST00000555317 TNS4Q8IZW8 715 aa14.54□□□□□ -0.08
SRP54-206ENST00000555317 BRI3BPQ8WY22 251 aa14.54□□□□□ -0.08
SRP54-206ENST00000555317 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
SRP54-206ENST00000555317 MS4A4AQ96JQ5 239 aa14.54□□□□□ -0.08
SRP54-206ENST00000555317 EHD4Q9H223 541 aa14.54□□□□□ -0.08
SRP54-206ENST00000555317 DCP1AQ9NPI6 582 aaPredicted RBP14.54□□□□□ -0.08
SRP54-206ENST00000555317 MYH8P13535 1937 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 DDX60LQ5H9U9 1706 aaKnown RBP14.53□□□□□ -0.08
SRP54-206ENST00000555317 TRIM75PA6NK02 468 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 CXCL11O14625 94 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 ASNSP08243 561 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 CAP2P40123 477 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 TAF1CQ15572 869 aaPredicted RBP14.53□□□□□ -0.08
SRP54-206ENST00000555317 TBC1D2Q9BYX2 928 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 PUS7LQ9H0K6 701 aaKnown RBP14.53□□□□□ -0.08
SRP54-206ENST00000555317 AS3MTQ9HBK9 375 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 KCNH4Q9UQ05 1017 aa14.53□□□□□ -0.08
SRP54-206ENST00000555317 USP17L5A8MUK1 530 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 PRKAB2O43741 272 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 GDF11O95390 407 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 CHGBP05060 677 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 NEFLP07196 543 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 GNAT2P19087 354 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 FASTKD5Q7L8L6 764 aaKnown RBP14.52□□□□□ -0.09
SRP54-206ENST00000555317 METTL16Q86W50 562 aaKnown RBP14.52□□□□□ -0.09
SRP54-206ENST00000555317 PTPN18Q99952 460 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 CFHR5Q9BXR6 569 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 ZFYVE28Q9HCC9 887 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 GINM1Q9NU53 330 aa14.52□□□□□ -0.09
SRP54-206ENST00000555317 GPAA1O43292 621 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 APPP05067 770 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 CRHR2Q13324 411 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 CERKLQ49MI3 558 aaPredicted RBP14.51□□□□□ -0.09
SRP54-206ENST00000555317 GADL1Q6ZQY3 521 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 OSBP2Q969R2 916 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 DNAJC18Q9H819 358 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 ZCCHC17Q9NP64 241 aaKnown RBP14.51□□□□□ -0.09
SRP54-206ENST00000555317 CABP5Q9NP86 173 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 AFG3L2Q9Y4W6 797 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 PTPRFP10586 1907 aa14.51□□□□□ -0.09
SRP54-206ENST00000555317 PHIPQ8WWQ0 1821 aa14.5□□□□□ -0.09
SRP54-206ENST00000555317 A0A0G2JLL6 359 aaPredicted RBP14.5□□□□□ -0.09
SRP54-206ENST00000555317 BTBD19C9JJ37 291 aa14.5□□□□□ -0.09
SRP54-206ENST00000555317 M0R2C6 588 aa14.5□□□□□ -0.09
SRP54-206ENST00000555317 GPR25O00155 361 aa14.5□□□□□ -0.09
SRP54-206ENST00000555317 FKTNO75072 461 aa14.5□□□□□ -0.09
SRP54-206ENST00000555317 TDO2P48775 406 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms