RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 FAM110CQ1W6H9 321 aa16.23■□□□□ 0.19
XRCC3-212ENST00000555231 PI16Q6UXB8 463 aa16.23■□□□□ 0.19
XRCC3-212ENST00000555231 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
XRCC3-212ENST00000555231 CRISPLD2Q9H0B8 497 aa16.23■□□□□ 0.19
XRCC3-212ENST00000555231 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.23■□□□□ 0.19
XRCC3-212ENST00000555231 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
XRCC3-212ENST00000555231 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
XRCC3-212ENST00000555231 HDAC5Q9UQL6 1122 aa16.23■□□□□ 0.19
XRCC3-212ENST00000555231 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
XRCC3-212ENST00000555231 SRGAP3O43295 1099 aa16.22■□□□□ 0.19
XRCC3-212ENST00000555231 HMGCS2P54868 508 aa16.22■□□□□ 0.19
XRCC3-212ENST00000555231 TRIM32Q13049 653 aa16.22■□□□□ 0.19
XRCC3-212ENST00000555231 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
XRCC3-212ENST00000555231 PROCA1Q8NCQ7 364 aaPredicted RBP16.22■□□□□ 0.19
XRCC3-212ENST00000555231 LRCH3Q96II8 777 aa16.22■□□□□ 0.19
XRCC3-212ENST00000555231 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
XRCC3-212ENST00000555231 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
XRCC3-212ENST00000555231 NECAB2Q7Z6G3 386 aa16.21■□□□□ 0.19
XRCC3-212ENST00000555231 TRMT2AQ8IZ69 625 aaKnown RBP16.21■□□□□ 0.19
XRCC3-212ENST00000555231 ZNF280CQ8ND82 737 aa16.21■□□□□ 0.19
XRCC3-212ENST00000555231 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.19
XRCC3-212ENST00000555231 RAI14Q9P0K7 980 aa16.21■□□□□ 0.19
XRCC3-212ENST00000555231 SIPA1L1O43166 1804 aa16.21■□□□□ 0.19
XRCC3-212ENST00000555231 DDX60LQ5H9U9 1706 aaKnown RBP16.2■□□□□ 0.18
XRCC3-212ENST00000555231 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
XRCC3-212ENST00000555231 LDHCP07864 332 aa16.2■□□□□ 0.18
XRCC3-212ENST00000555231 CAP2P40123 477 aa16.2■□□□□ 0.18
XRCC3-212ENST00000555231 GCLCP48506 637 aaPredicted RBP16.2■□□□□ 0.18
XRCC3-212ENST00000555231 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
XRCC3-212ENST00000555231 TEX11Q8IYF3 940 aa16.2■□□□□ 0.18
XRCC3-212ENST00000555231 C7orf61Q8IZ16 206 aa16.2■□□□□ 0.18
XRCC3-212ENST00000555231 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
XRCC3-212ENST00000555231 ASCC2Q9H1I8 757 aaPredicted RBP16.2■□□□□ 0.18
XRCC3-212ENST00000555231 ZMYND8Q9ULU4 1186 aaPredicted RBP16.2■□□□□ 0.18
XRCC3-212ENST00000555231 CDK5RAP2Q96SN8 1893 aa16.19■□□□□ 0.18
XRCC3-212ENST00000555231 A0A1W2PPC1 479 aa16.19■□□□□ 0.18
XRCC3-212ENST00000555231 USP17L5A8MUK1 530 aa16.19■□□□□ 0.18
XRCC3-212ENST00000555231 PEX10O60683 326 aa16.19■□□□□ 0.18
XRCC3-212ENST00000555231 HMGCRP04035 888 aa16.19■□□□□ 0.18
XRCC3-212ENST00000555231 GSTO1P78417 241 aa16.19■□□□□ 0.18
XRCC3-212ENST00000555231 GJD2Q9UKL4 321 aa16.19■□□□□ 0.18
XRCC3-212ENST00000555231 COL2A1P02458 1487 aaPredicted RBP16.18■□□□□ 0.18
XRCC3-212ENST00000555231 CAPN2P17655 700 aa16.18■□□□□ 0.18
XRCC3-212ENST00000555231 PABPC4Q13310 644 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■■■■ 28.7
XRCC3-212ENST00000555231 SLC17A8Q8NDX2 589 aa16.18■□□□□ 0.18
XRCC3-212ENST00000555231 SH3RF3Q8TEJ3 882 aaPredicted RBP16.18■□□□□ 0.18
XRCC3-212ENST00000555231 HMX1Q9NP08 348 aaPredicted RBP16.18■□□□□ 0.18
XRCC3-212ENST00000555231 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
XRCC3-212ENST00000555231 RPTORQ8N122 1335 aa16.18■□□□□ 0.18
XRCC3-212ENST00000555231 GNAI3P08754 354 aa16.17■□□□□ 0.18
XRCC3-212ENST00000555231 CT47B1P0C2W7 299 aaPredicted RBP16.17■□□□□ 0.18
XRCC3-212ENST00000555231 CYP2B6P20813 491 aa16.17■□□□□ 0.18
XRCC3-212ENST00000555231 MCAMP43121 646 aa16.17■□□□□ 0.18
XRCC3-212ENST00000555231 MTX1Q13505 466 aa16.17■□□□□ 0.18
XRCC3-212ENST00000555231 SH3D19Q5HYK7 790 aa16.17■□□□□ 0.18
XRCC3-212ENST00000555231 AS3MTQ9HBK9 375 aa16.17■□□□□ 0.18
XRCC3-212ENST00000555231 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
XRCC3-212ENST00000555231 MAP4K4O95819 1239 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-212ENST00000555231 SYN1P17600 705 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-212ENST00000555231 MNX1P50219 401 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-212ENST00000555231 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
XRCC3-212ENST00000555231 JAG1P78504 1218 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 MTMR2Q13614 643 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-212ENST00000555231 ANKLE1Q8NAG6 615 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 TRIB2Q92519 343 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 P2RX7Q99572 595 aaKnown RBP16.16■□□□□ 0.18
XRCC3-212ENST00000555231 GDF15Q99988 308 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 TBC1D2Q9BYX2 928 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 SNRKQ9NRH2 765 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 AATFQ9NY61 560 aaKnown RBP eCLIP16.16■□□□□ 0.18
XRCC3-212ENST00000555231 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
XRCC3-212ENST00000555231 MAST2Q6P0Q8 1798 aa16.15■□□□□ 0.18
XRCC3-212ENST00000555231 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
XRCC3-212ENST00000555231 DLL1O00548 723 aa16.15■□□□□ 0.18
XRCC3-212ENST00000555231 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
XRCC3-212ENST00000555231 MAPKAPK5Q8IW41 473 aa16.15■□□□□ 0.18
XRCC3-212ENST00000555231 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
XRCC3-212ENST00000555231 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
XRCC3-212ENST00000555231 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
XRCC3-212ENST00000555231 FOCADQ5VW36 1801 aa16.15■□□□□ 0.18
XRCC3-212ENST00000555231 GDF11O95390 407 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 BACE1P56817 501 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.17
XRCC3-212ENST00000555231 TGFBRAP1Q8WUH2 860 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 WDR18Q9BV38 432 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 C11orf49Q9H6J7 331 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 DNAJC18Q9H819 358 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 TXNRD2Q9NNW7 524 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 TMOD4Q9NZQ9 345 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 PI4KBQ9UBF8 816 aa16.14■□□□□ 0.17
XRCC3-212ENST00000555231 UQCRFS1P1P0C7P4 283 aa16.13■□□□□ 0.17
XRCC3-212ENST00000555231 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
XRCC3-212ENST00000555231 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
XRCC3-212ENST00000555231 ADGRA1Q86SQ6 560 aa16.13■□□□□ 0.17
XRCC3-212ENST00000555231 OGDHLQ9ULD0 1010 aa16.13■□□□□ 0.17
XRCC3-212ENST00000555231 BAG3O95817 575 aa16.12■□□□□ 0.17
XRCC3-212ENST00000555231 GNAI2P04899 355 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms