RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
GABRB3-208ENST00000555094 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
GABRB3-208ENST00000555094 PLCB2Q00722 1185 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 SCRN1Q12765 414 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 PKP1Q13835 747 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 SLC4A8Q2Y0W8 1093 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 ESR2Q92731 530 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 SENP2Q9HC62 589 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 DDX4Q9NQI0 724 aaKnown RBP12.78□□□□□ -0.36
GABRB3-208ENST00000555094 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
GABRB3-208ENST00000555094 SBF1O95248 1867 aa12.77□□□□□ -0.36
GABRB3-208ENST00000555094 NID2Q14112 1375 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 PRDM1O75626 825 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 PRELPP51888 382 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 SGMS1Q86VZ5 419 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 AMOTL1Q8IY63 956 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 FHDC1Q9C0D6 1143 aaPredicted RBP12.77□□□□□ -0.37
GABRB3-208ENST00000555094 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
GABRB3-208ENST00000555094 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
GABRB3-208ENST00000555094 DTNBO60941 627 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 POLR3DP05423 398 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-208ENST00000555094 GJB2P29033 226 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 LIFRP42702 1097 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 PLCD1P51178 756 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 NUCB2P80303 420 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 CXCL9Q07325 125 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 PDE4BQ07343 736 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 SEC23AQ15436 765 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 NCOA5Q9HCD5 579 aaKnown RBP12.76□□□□□ -0.37
GABRB3-208ENST00000555094 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
GABRB3-208ENST00000555094 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
GABRB3-208ENST00000555094 TNKSO95271 1327 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
GABRB3-208ENST00000555094 CTDNEP1O95476 244 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 NT5C2P49902 561 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 NFIAQ12857 509 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 PICALMQ13492 652 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 SART3Q15020 963 aaKnown RBP12.75□□□□□ -0.37
GABRB3-208ENST00000555094 CFAP100Q494V2 611 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 SLC44A5Q8NCS7 719 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 AGBL3Q8NEM8 1001 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
GABRB3-208ENST00000555094 ZKSCAN3Q9BRR0 538 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
GABRB3-208ENST00000555094 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-208ENST00000555094 NAP1L2Q9ULW6 460 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-208ENST00000555094 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-208ENST00000555094 COL2A1P02458 1487 aaPredicted RBP12.75□□□□□ -0.37
GABRB3-208ENST00000555094 JAK2O60674 1132 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 BRD1O95696 1058 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
GABRB3-208ENST00000555094 CCT2P78371 535 aaKnown RBP12.74□□□□□ -0.37
GABRB3-208ENST00000555094 WTAPQ15007 396 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 CIAPIN1Q6FI81 312 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 ENAHQ8N8S7 591 aaPredicted RBP12.74□□□□□ -0.37
GABRB3-208ENST00000555094 NSUN7Q8NE18 718 aaKnown RBP12.74□□□□□ -0.37
GABRB3-208ENST00000555094 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 LLPHQ9BRT6 129 aaKnown RBP12.74□□□□□ -0.37
GABRB3-208ENST00000555094 IDI2Q9BXS1 227 aa12.74□□□□□ -0.37
GABRB3-208ENST00000555094 PTPDC1A2A3K4 754 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 RASA1P20936 1047 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 CACNB3P54284 484 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-208ENST00000555094 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 PLIN4Q96Q06 1357 aa12.73□□□□□ -0.37
GABRB3-208ENST00000555094 ERICH2A1L162 156 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 ZBTB43O43298 467 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 SYT1P21579 422 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 CDK8P49336 464 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 GABPAQ06546 454 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 MICU3Q86XE3 530 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 IQCA1Q86XH1 822 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 MYH15Q9Y2K3 1946 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
GABRB3-208ENST00000555094 MYH6P13533 1939 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 CCDC69A6NI79 296 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 TSPY2A6NKD2 308 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 FZD9O00144 591 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 METAP2P50579 478 aaKnown RBP eCLIP12.72□□□□□ -0.37
GABRB3-208ENST00000555094 RCAN1P53805 252 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 TNIP1Q15025 636 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
GABRB3-208ENST00000555094 TTC6Q86TZ1 520 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms