RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 APPBP2Q92624 585 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 CSRNP1Q96S65 589 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 ZNF341Q9BYN7 854 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 OSBPL5Q9H0X9 879 aaPredicted RBP12.74□□□□□ -0.37
TMEM260-206ENST00000555046 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
TMEM260-206ENST00000555046 UBE2Q2LH0YL09 131 aa12.73□□□□□ -0.37
TMEM260-206ENST00000555046 PRKG1Q13976 671 aa12.73□□□□□ -0.37
TMEM260-206ENST00000555046 ADGRA1Q86SQ6 560 aa12.73□□□□□ -0.37
TMEM260-206ENST00000555046 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
TMEM260-206ENST00000555046 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
TMEM260-206ENST00000555046 HERC5Q9UII4 1024 aaKnown RBP12.73□□□□□ -0.37
TMEM260-206ENST00000555046 CSADQ9Y600 493 aa12.73□□□□□ -0.37
TMEM260-206ENST00000555046 ARAP2Q8WZ64 1704 aa12.73□□□□□ -0.37
TMEM260-206ENST00000555046 FAM155AB1AL88 458 aaPredicted RBP12.72□□□□□ -0.37
TMEM260-206ENST00000555046 POLR3DP05423 398 aaPredicted RBP12.72□□□□□ -0.37
TMEM260-206ENST00000555046 DYNLL1P63167 89 aaKnown RBP12.72□□□□□ -0.37
TMEM260-206ENST00000555046 MAP3K10Q02779 954 aa12.72□□□□□ -0.37
TMEM260-206ENST00000555046 MIGA2Q7L4E1 593 aa12.72□□□□□ -0.37
TMEM260-206ENST00000555046 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
TMEM260-206ENST00000555046 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 MBD4O95243 580 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 MFAP1P55081 439 aaKnown RBP12.71□□□□□ -0.37
TMEM260-206ENST00000555046 INHBEP58166 350 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 GIMAP6Q6P9H5 292 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 ZFPM1Q8IX07 1006 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 CRACR2BQ8N4Y2 399 aaPredicted RBP12.71□□□□□ -0.37
TMEM260-206ENST00000555046 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 COL25A1Q9BXS0 654 aaPredicted RBP12.71□□□□□ -0.37
TMEM260-206ENST00000555046 NACAP1Q9BZK3 213 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMEM260-206ENST00000555046 HELLSQ9NRZ9 838 aa12.71□□□□□ -0.37
TMEM260-206ENST00000555046 ATRNL1Q5VV63 1379 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 FLT1P17948 1338 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
TMEM260-206ENST00000555046 PATL2C9JE40 543 aaKnown RBP12.7□□□□□ -0.38
TMEM260-206ENST00000555046 CTNND1O60716 968 aaKnown RBP12.7□□□□□ -0.38
TMEM260-206ENST00000555046 APPP05067 770 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM260-206ENST00000555046 WRNIP1Q96S55 665 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 STRBPQ96SI9 672 aaKnown RBP12.7□□□□□ -0.38
TMEM260-206ENST00000555046 PUS7LQ9H0K6 701 aaKnown RBP12.7□□□□□ -0.38
TMEM260-206ENST00000555046 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 MCM9Q9NXL9 1143 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 ZNF112Q9UJU3 913 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 SLC4A4Q9Y6R1 1079 aa12.7□□□□□ -0.38
TMEM260-206ENST00000555046 TTC28Q96AY4 2481 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 ZBTB48P10074 688 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-206ENST00000555046 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-206ENST00000555046 MCMDC2Q4G0Z9 681 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 ZMYM1Q5SVZ6 1142 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 MOB2Q70IA6 237 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 DCP1AQ9NPI6 582 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-206ENST00000555046 PICK1Q9NRD5 415 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 SERPINB13Q9UIV8 391 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 PALD1Q9ULE6 856 aa12.69□□□□□ -0.38
TMEM260-206ENST00000555046 SLC10A3P09131 477 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 SDSP20132 328 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 PDE4AP27815 886 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 SREBF2Q12772 1141 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 OTUD7BQ6GQQ9 843 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 FBXO46Q6PJ61 603 aaPredicted RBP12.68□□□□□ -0.38
TMEM260-206ENST00000555046 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
TMEM260-206ENST00000555046 ERO1BQ86YB8 467 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 LCORLQ8N3X6 602 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 TBC1D2Q9BYX2 928 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 EHD4Q9H223 541 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 RFX7Q2KHR2 1363 aa12.68□□□□□ -0.38
TMEM260-206ENST00000555046 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
TMEM260-206ENST00000555046 GPAA1O43292 621 aa12.67□□□□□ -0.38
TMEM260-206ENST00000555046 SLC3A2P08195 630 aaKnown RBP12.67□□□□□ -0.38
TMEM260-206ENST00000555046 PPATQ06203 517 aa12.67□□□□□ -0.38
TMEM260-206ENST00000555046 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
TMEM260-206ENST00000555046 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
TMEM260-206ENST00000555046 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
TMEM260-206ENST00000555046 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
TMEM260-206ENST00000555046 SAP30BPQ9UHR5 308 aaKnown RBP12.67□□□□□ -0.38
TMEM260-206ENST00000555046 MANSC4A6NHS7 340 aaPredicted RBP12.66□□□□□ -0.38
TMEM260-206ENST00000555046 PHF20L1A8MW92 1017 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 GTF2A2P52657 109 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 VGLL4Q14135 290 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 SCYL3Q8IZE3 742 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 ZKSCAN4Q969J2 545 aaPredicted RBP12.66□□□□□ -0.38
TMEM260-206ENST00000555046 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
TMEM260-206ENST00000555046 ARPP21Q9UBL0 812 aaPredicted RBP12.66□□□□□ -0.38
TMEM260-206ENST00000555046 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.38
TMEM260-206ENST00000555046 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms