RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 KIAA1468Q9P260 1216 aa24.59■■□□□ 1.53
ARHGEF40-204ENST00000555038 TNKSO95271 1327 aa24.59■■□□□ 1.53
ARHGEF40-204ENST00000555038 KIAA1551Q9HCM1 1747 aa24.58■■□□□ 1.53
ARHGEF40-204ENST00000555038 TM4SF1P30408 202 aa24.58■■□□□ 1.53
ARHGEF40-204ENST00000555038 SPTY2D1Q68D10 685 aaPredicted RBP24.58■■□□□ 1.53
ARHGEF40-204ENST00000555038 C11orf57Q6ZUT1 292 aaPredicted RBP24.58■■□□□ 1.53
ARHGEF40-204ENST00000555038 NOSTRINQ8IVI9 506 aa24.58■■□□□ 1.53
ARHGEF40-204ENST00000555038 RNF26Q9BY78 433 aaPredicted RBP24.58■■□□□ 1.53
ARHGEF40-204ENST00000555038 SPTLC3Q9NUV7 552 aa24.58■■□□□ 1.53
ARHGEF40-204ENST00000555038 ZNF202O95125 648 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 CALM1P0DP23 149 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 CALM2P0DP24 149 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 CALM3P0DP25 149 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 ADRA2BP18089 450 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 RBM6P78332 1123 aaKnown RBP24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 ZRSR1Q15695 479 aaKnown RBP24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 ZKSCAN3Q9BRR0 538 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 CRNKL1Q9BZJ0 848 aaKnown RBP24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 ATP8A2Q9NTI2 1148 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 DLEC1Q9Y238 1755 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 BECN2A8MW95 431 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 CUTAO60888 179 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 PFKFB1P16118 471 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 IQCA1Q86XH1 822 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 ZNF384Q8TF68 577 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 MRFAP1L1Q96HT8 127 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 ZSCAN10Q96SZ4 725 aaPredicted RBP24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 RBM28Q9NW13 759 aaKnown RBP24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 HPSEQ9Y251 543 aa24.57■■□□□ 1.52
ARHGEF40-204ENST00000555038 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 WTIPA6NIX2 430 aaPredicted RBP24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 ORC4O43929 436 aa24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 RFC4P35249 363 aa24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 DYNLL1P63167 89 aaKnown RBP24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 MECOMQ03112 1051 aa24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 NOLC1Q14978 699 aaKnown RBP eCLIP24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 TRAPPC3LQ5T215 181 aa24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 IRS2Q9Y4H2 1338 aa24.56■■□□□ 1.52
ARHGEF40-204ENST00000555038 WDHD1O75717 1129 aaPredicted RBP24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 SLC3A2P08195 630 aaKnown RBP24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 RILPL1Q5EBL4 403 aa24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 ZNF830Q96NB3 372 aaPredicted RBP24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 LEMD3Q9Y2U8 911 aa24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 MORC2Q9Y6X9 1032 aaPredicted RBP24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 LAMB1P07942 1786 aa24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 CCDC88AQ3V6T2 1871 aa24.55■■□□□ 1.52
ARHGEF40-204ENST00000555038 XBP1P17861 261 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 SBK1Q52WX2 424 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 CTR9Q6PD62 1173 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 CATIPQ7Z7H3 387 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 SPC24Q8NBT2 197 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 GJD4Q96KN9 370 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 ARPP21Q9UBL0 812 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 ONECUT3O60422 494 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 DDAH1O94760 285 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 GRAPQ13588 217 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 RESP18Q5W5W9 173 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 DIS3L2Q8IYB7 885 aaKnown RBP24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 ELOA2Q8IYF1 753 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 GRAPLQ8TC17 118 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 KIAA1524Q8TCG1 905 aa24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.54■■□□□ 1.52
ARHGEF40-204ENST00000555038 TNRC6CQ9HCJ0 1690 aaKnown RBP24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 KLRK1P26718 216 aa24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 SYKP43405 635 aa24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 IFIT1BQ5T764 474 aaKnown RBP24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 SMIM5Q71RC9 77 aa24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 DHX40Q8IX18 779 aaKnown RBP24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 ENAHQ8N8S7 591 aaPredicted RBP24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 NUP133Q8WUM0 1156 aa24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 KCNF1Q9H3M0 494 aa24.53■■□□□ 1.52
ARHGEF40-204ENST00000555038 MROH7-TTC4A0A0A0MT08 1334 aa24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 AKAP17AQ02040 695 aaKnown RBP24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 DRC7Q8IY82 874 aa24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 NOL10Q9BSC4 688 aaKnown RBP24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 BAZ2AQ9UIF9 1905 aaKnown RBP24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 NPHP1O15259 732 aa24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 MARCKSP29966 332 aaPredicted RBP24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 NLRP12P59046 1061 aa24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 C15orf52Q6ZUT6 534 aaKnown RBP24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 WDR66Q8TBY9 1149 aa24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 DCP1AQ9NPI6 582 aaPredicted RBP24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 TFCP2L1Q9NZI6 479 aa24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 CEP131Q9UPN4 1083 aa24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 R3HCC1Q9Y3T6 440 aaKnown RBP24.52■■□□□ 1.52
ARHGEF40-204ENST00000555038 GUCY1A2P33402 732 aa24.51■■□□□ 1.51
ARHGEF40-204ENST00000555038 SHC4Q6S5L8 630 aa24.51■■□□□ 1.51
ARHGEF40-204ENST00000555038 MPNDQ8N594 471 aa24.51■■□□□ 1.51
ARHGEF40-204ENST00000555038 KRI1Q8N9T8 703 aaKnown RBP24.51■■□□□ 1.51
ARHGEF40-204ENST00000555038 BTBD18B2RXH4 712 aa24.5■■□□□ 1.51
ARHGEF40-204ENST00000555038 USP17L12C9JPN9 530 aa24.5■■□□□ 1.51
ARHGEF40-204ENST00000555038 USP17L21D6R901 530 aa24.5■■□□□ 1.51
ARHGEF40-204ENST00000555038 PRPF3O43395 683 aaKnown RBP24.5■■□□□ 1.51
ARHGEF40-204ENST00000555038 ANO8Q9HCE9 1232 aaPredicted RBP24.5■■□□□ 1.51
ARHGEF40-204ENST00000555038 CLIP2Q9UDT6 1046 aa24.5■■□□□ 1.51
ARHGEF40-204ENST00000555038 NEMFO60524 1076 aa24.49■■□□□ 1.51
ARHGEF40-204ENST00000555038 CNBD1Q8NA66 436 aa24.49■■□□□ 1.51
ARHGEF40-204ENST00000555038 TUBE1Q9UJT0 475 aa24.49■■□□□ 1.51
ARHGEF40-204ENST00000555038 MYH2Q9UKX2 1941 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms