RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	KDR	P35968	1356 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	FER1L6	Q2WGJ9	1857 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994		H0YIN7	160 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	GPR37L1	O60883	481 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	TRPA1	O75762	1119 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	CELF2	O95319	508 aa	Known RBP	6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	ALB	P02768	609 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	PPP2R1A	P30153	589 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	SCNN1D	P51172	638 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	SMTN	P53814	917 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	SAPCD2	Q86UD0	394 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	SYNE4	Q8N205	404 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	ATG3	Q9NT62	314 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	NUDC	Q9Y266	331 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	CNTNAP4	Q9C0A0	1308 aa		6.18	□□□□□ -1.42
ATXN3-231	ENST00000554994	SCN11A	Q9UI33	1791 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	NEFM	P07197	916 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	U2AF1L5	P0DN76	240 aa	Predicted RBP	6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	TM4SF1	P30408	202 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	U2AF1	Q01081	240 aa	Known RBP eCLIP	6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	NFIX	Q14938	502 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	C1orf141	Q5JVX7	400 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	USPL1	Q5W0Q7	1092 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	ZNF530	Q6P9A1	599 aa	Predicted RBP	6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	AEBP1	Q8IUX7	1158 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	USP3	Q9Y6I4	520 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	LTBP3	Q9NS15	1303 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	KIF24	Q5T7B8	1368 aa		6.17	□□□□□ -1.42
ATXN3-231	ENST00000554994	AFDN	P55196	1824 aa	Known RBP	6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	TRPM7	Q96QT4	1865 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	IL13	P35225	146 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	NOG	Q13253	232 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	COL9A3	Q14050	684 aa	Predicted RBP	6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	IFNL2	Q8IZJ0	200 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	MICALL1	Q8N3F8	863 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	TP53INP1	Q96A56	240 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	ZNF277	Q9NRM2	450 aa	Predicted RBP	6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	RNF186	Q9NXI6	227 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	ZDHHC3	Q9NYG2	299 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	STARD13	Q9Y3M8	1113 aa		6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	MYH14	Q7Z406	1995 aa	Known RBP	6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	COL11A2	P13942	1736 aa	Predicted RBP	6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	COL5A3	P25940	1745 aa	Predicted RBP	6.16	□□□□□ -1.42
ATXN3-231	ENST00000554994	CEP290	O15078	2479 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	C9orf172	C9J069	976 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	EFS	O43281	561 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	SERPINB2	P05120	415 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	H2AFB1	P0C5Y9	115 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	H2AFB2	P0C5Z0	115 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	EPS15	P42566	896 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	CRKL	P46109	303 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	CABP4	P57796	275 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	LAMC2	Q13753	1193 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	RALBP1	Q15311	655 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	AMOT	Q4VCS5	1084 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	AKAP4	Q5JQC9	854 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	LRRC69	Q6ZNQ3	347 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	MTMR14	Q8NCE2	650 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	GLIS2	Q9BZE0	524 aa	Predicted RBP	6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994	NEUROD4	Q9HD90	331 aa		6.15	□□□□□ -1.42
ATXN3-231	ENST00000554994		H0YGN5	161 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	ANP32C	O43423	234 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	SIN3B	O75182	1162 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	NID1	P14543	1247 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	TXLNA	P40222	546 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	ADH7	P40394	386 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	KIF23	Q02241	960 aa	Predicted RBP	6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	TBC1D8B	Q0IIM8	1120 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	MBTPS1	Q14703	1052 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	SAMD5	Q5TGI4	173 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	PRPF40B	Q6NWY9	871 aa	Known RBP	6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	SHISA2	Q6UWI4	295 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	OLFM4	Q6UX06	510 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	PHTF2	Q8N3S3	785 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	SLC30A3	Q99726	388 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	SAGE1	Q9NXZ1	904 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	RAPGEFL1	Q9UHV5	662 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	HDAC9	Q9UKV0	1011 aa		6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	MKI67	P46013	3256 aa	Known RBP	6.14	□□□□□ -1.43
ATXN3-231	ENST00000554994	NRXN2	Q9P2S2	1712 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	CACNA1S	Q13698	1873 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	COL6A3	P12111	3177 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994		A6NJY4	79 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	ADARB2-AS1	A8MUL3	147 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	PTCD1	O75127	700 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	HSP90AB1	P08238	724 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	PHKG2	P15735	406 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	SELP	P16109	830 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	LMOD1	P29536	600 aa	Predicted RBP	6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	PRKAR2B	P31323	418 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	HUNK	P57058	714 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	SFSWAP	Q12872	951 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	ADGRE1	Q14246	886 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	WDR43	Q15061	677 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	NEUROD2	Q15784	382 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	DLK2	Q6UY11	383 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	TXNRD3	Q86VQ6	643 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	NFATC2IP	Q8NCF5	419 aa		6.13	□□□□□ -1.43
ATXN3-231	ENST00000554994	MDFI	Q99750	246 aa		6.13	□□□□□ -1.43

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