RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ARID5BQ14865 1188 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 CEP57L1Q8IYX8 460 aa14.6□□□□□ -0.07
PPP4R3A-206ENST00000554943 RIOK3O14730 519 aaKnown RBP14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 POLR3DP05423 398 aaPredicted RBP14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 FGD1P98174 961 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 CCDC93Q567U6 631 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 AIDAQ96BJ3 306 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 INTS13Q9NVM9 706 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 NT5C2P49902 561 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 PHKBQ93100 1093 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 TRIM5Q9C035 493 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 USP27XA6NNY8 438 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 SMTNL1A8MU46 457 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 ACTN4O43707 911 aaKnown RBP14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 IDH1O75874 414 aaKnown RBP14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 PPARAQ07869 468 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 TMTC2Q8N394 836 aa14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 RNF26Q9BY78 433 aaPredicted RBP14.59□□□□□ -0.07
PPP4R3A-206ENST00000554943 ORC4O43929 436 aa14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 KRBA2Q6ZNG9 492 aa14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 AOPEPQ8N6M6 819 aa14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 HELBQ8NG08 1087 aaPredicted RBP14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 ANKS1AQ92625 1134 aa14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 ATP6V1AP38606 617 aa14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 TROAPQ12815 778 aa14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 FAM84BQ96KN1 310 aaPredicted RBP14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 MINPP1Q9UNW1 487 aa14.58□□□□□ -0.08
PPP4R3A-206ENST00000554943 M0R2N6 131 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 DDB1Q16531 1140 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 TMEM67Q5HYA8 995 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 CT47A1Q5JQC4 288 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 E4F1Q66K89 784 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 CCAR2Q8N163 923 aaKnown RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 NAT10Q9H0A0 1025 aaKnown RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 L2HGDHQ9H9P8 463 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 SRPRBQ9Y5M8 271 aaKnown RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 SIPA1L1O43166 1804 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 WTIPA6NIX2 430 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 TRDNQ13061 729 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 MORC3Q14149 939 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 STK38Q15208 465 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 LONRF3Q496Y0 759 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 SBK1Q52WX2 424 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 PAXBP1Q9Y5B6 917 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 PRPF3O43395 683 aaKnown RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 PPFIA3O75145 1194 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 DEXIO95424 95 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 IARSP41252 1262 aaKnown RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 GSDMDP57764 484 aa14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 C15orf52Q6ZUT6 534 aaKnown RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 ERCC4Q92889 916 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 NOL10Q9BSC4 688 aaKnown RBP14.57□□□□□ -0.08
PPP4R3A-206ENST00000554943 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 SMIM22K7EJ46 135 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 FANCBQ8NB91 859 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 WASF1Q92558 559 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 GOLGA8AA7E2F4 631 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 SLC3A2P08195 630 aaKnown RBP14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 NOVP48745 357 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 ERFEQ4G0M1 354 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 MFSD6Q6ZSS7 791 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 ENAHQ8N8S7 591 aaPredicted RBP14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 NSUN4Q96CB9 384 aaKnown RBP14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 GRIN1Q05586 938 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 NCBP1Q09161 790 aaKnown RBP14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 NAPBQ9H115 298 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 ATAD5Q96QE3 1844 aa14.56□□□□□ -0.08
PPP4R3A-206ENST00000554943 FANCGO15287 622 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 FECHP22830 423 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 FOSBP53539 338 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 SSRP1Q08945 709 aaKnown RBP14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 DHX8Q14562 1220 aaKnown RBP14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 PDE4BQ07343 736 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 RILPL1Q5EBL4 403 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 XPO4Q9C0E2 1151 aaKnown RBP14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 SLC12A7Q9Y666 1083 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 SLC4A4Q9Y6R1 1079 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 CNTNAP5Q8WYK1 1306 aa14.55□□□□□ -0.08
PPP4R3A-206ENST00000554943 PBX1P40424 430 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 RAB11FIP4Q86YS3 637 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 MYL10Q9BUA6 226 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 RNF41Q9H4P4 317 aaPredicted RBP14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 AATFQ9NY61 560 aaKnown RBP eCLIP14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 CCDC69A6NI79 296 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 FAM177BA6PVY3 158 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 CPLX1O14810 134 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 RXRAP19793 462 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 SYKP43405 635 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 EARS2Q5JPH6 523 aaKnown RBP14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 KRI1Q8N9T8 703 aaKnown RBP14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 TRIML1Q8N9V2 468 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 CLIC6Q96NY7 704 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 FAM13BQ9NYF5 915 aa14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 NIP7Q9Y221 180 aaKnown RBP eCLIP14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 IGHMBP2P38935 993 aaKnown RBP14.54□□□□□ -0.08
PPP4R3A-206ENST00000554943 CCDC94Q9BW85 323 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms