RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 PA2G4Q9UQ80 394 aaKnown RBP11.94□□□□□ -0.5
TMEM253-204ENST00000554844 HMGCRP04035 888 aa11.93□□□□□ -0.5
TMEM253-204ENST00000554844 ADORA1P30542 326 aa11.93□□□□□ -0.5
TMEM253-204ENST00000554844 FAM163AQ96GL9 167 aaPredicted RBP11.93□□□□□ -0.5
TMEM253-204ENST00000554844 TRIM34Q9BYJ4 488 aa11.93□□□□□ -0.5
TMEM253-204ENST00000554844 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.93□□□□□ -0.5
TMEM253-204ENST00000554844 COPRSQ9NQ92 184 aa11.93□□□□□ -0.5
TMEM253-204ENST00000554844 DDX4Q9NQI0 724 aaKnown RBP11.93□□□□□ -0.5
TMEM253-204ENST00000554844 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 PTPRFP10586 1907 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 A0A1B0GUL7 405 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 TBC1D12O60347 775 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 CT47B1P0C2W7 299 aaPredicted RBP11.92□□□□□ -0.5
TMEM253-204ENST00000554844 IRX3P78415 501 aaPredicted RBP11.92□□□□□ -0.5
TMEM253-204ENST00000554844 MAP3K10Q02779 954 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 SPP2Q13103 211 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 SH3BP5LQ7L8J4 393 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 SLC17A8Q8NDX2 589 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 NEUROD6Q96NK8 337 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 PAK6Q9NQU5 681 aaPredicted RBP11.92□□□□□ -0.5
TMEM253-204ENST00000554844 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
TMEM253-204ENST00000554844 GPR75-ASB3A0A0A6YYF3 556 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 GNAI3P08754 354 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 HMGCS2P54868 508 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 TIMM10P62072 90 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 MECOMQ03112 1051 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 CCDC84Q86UT8 332 aaPredicted RBP11.91□□□□□ -0.5
TMEM253-204ENST00000554844 CCAR1Q8IX12 1150 aaKnown RBP11.91□□□□□ -0.5
TMEM253-204ENST00000554844 PAWRQ96IZ0 340 aaKnown RBP11.91□□□□□ -0.5
TMEM253-204ENST00000554844 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
TMEM253-204ENST00000554844 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
TMEM253-204ENST00000554844 TMOD4Q9NZQ9 345 aa11.91□□□□□ -0.5
TMEM253-204ENST00000554844 NOB1Q9ULX3 412 aaKnown RBP11.91□□□□□ -0.5
TMEM253-204ENST00000554844 SRGAP3O43295 1099 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 TFCP2Q12800 502 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 PDE3AQ14432 1141 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 TEX11Q8IYF3 940 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 SPATA5Q8NB90 893 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 CRISPLD2Q9H0B8 497 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 PRO3102Q9H379 93 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 LRP2BPQ9P2M1 347 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.9□□□□□ -0.5
TMEM253-204ENST00000554844 STAP2Q9UGK3 403 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 HERC5Q9UII4 1024 aaKnown RBP11.9□□□□□ -0.5
TMEM253-204ENST00000554844 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
TMEM253-204ENST00000554844 COL2A1P02458 1487 aaPredicted RBP11.89□□□□□ -0.51
TMEM253-204ENST00000554844 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 FAM196BA6NMK8 535 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 BAG3O95817 575 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 PLCG2P16885 1265 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 CAP2P40123 477 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 RHBDL3P58872 404 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
TMEM253-204ENST00000554844 MEIS3Q99687 375 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
TMEM253-204ENST00000554844 LOC285556D6RIA3 1793 aa11.89□□□□□ -0.51
TMEM253-204ENST00000554844 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 SLURP2P0DP57 97 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 G3BP1Q13283 466 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM253-204ENST00000554844 TRMT44Q8IYL2 757 aaKnown RBP11.88□□□□□ -0.51
TMEM253-204ENST00000554844 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
TMEM253-204ENST00000554844 SOCS4Q8WXH5 440 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 NSUN4Q96CB9 384 aaKnown RBP11.88□□□□□ -0.51
TMEM253-204ENST00000554844 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 DHX36Q9H2U1 1008 aaKnown RBP11.88□□□□□ -0.51
TMEM253-204ENST00000554844 C11orf49Q9H6J7 331 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 HMG20BQ9P0W2 317 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 PI4KBQ9UBF8 816 aa11.88□□□□□ -0.51
TMEM253-204ENST00000554844 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
TMEM253-204ENST00000554844 DLL1O00548 723 aa11.87□□□□□ -0.51
TMEM253-204ENST00000554844 ASNSP08243 561 aa11.87□□□□□ -0.51
TMEM253-204ENST00000554844 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
TMEM253-204ENST00000554844 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
TMEM253-204ENST00000554844 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
TMEM253-204ENST00000554844 GTF3C2Q8WUA4 911 aaPredicted RBP11.87□□□□□ -0.51
TMEM253-204ENST00000554844 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
TMEM253-204ENST00000554844 DOCK3Q8IZD9 2030 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 C19orf81C9J6K1 198 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
TMEM253-204ENST00000554844 HLA-DOAP06340 250 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
TMEM253-204ENST00000554844 CYP2B6P20813 491 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 ARID4AP29374 1257 aaPredicted RBP11.86□□□□□ -0.51
TMEM253-204ENST00000554844 MAPK4P31152 587 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 BMP8BP34820 402 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
TMEM253-204ENST00000554844 MTMR2Q13614 643 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 TBC1D9Q6ZT07 1266 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 GPRC5AQ8NFJ5 357 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms