RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 KIAA0754O94854 1291 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 PTPREP23469 700 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 KRT2P35908 639 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 SKIDA1Q1XH10 827 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 TMEM266Q2M3C6 531 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 TDRD12Q587J7 1177 aaKnown RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 HDXQ7Z353 690 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 ENGASEQ8NFI3 743 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 ZKSCAN3Q9BRR0 538 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 RNF26Q9BY78 433 aaPredicted RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 FOXP1Q9H334 677 aaPredicted RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 TMX1Q9H3N1 280 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 SEC63Q9UGP8 760 aaKnown RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 SERTAD1Q9UHV2 236 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 MYO6Q9UM54 1294 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 KCNJ14Q9UNX9 436 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 NIP7Q9Y221 180 aaKnown RBP eCLIP4.41□□□□□ -1.7
KTN1-217ENST00000554831 TAF6LQ9Y6J9 622 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 PIK3C2BO00750 1634 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 MAGEB6P1A0A0J9YX57 407 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 SMC1AQ14683 1233 aaKnown RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 NAA30Q147X3 362 aaPredicted RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 SPECC1Q5M775 1068 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 STOX1Q6ZVD7 989 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 TAF4BQ92750 862 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 VPS16Q9H269 839 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 RNF216Q9NWF9 866 aaPredicted RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 PUF60Q9UHX1 559 aaKnown RBP4.41□□□□□ -1.7
KTN1-217ENST00000554831 WWC3Q9ULE0 1092 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 GUCA1BQ9UMX6 200 aa4.41□□□□□ -1.7
KTN1-217ENST00000554831 WDR19Q8NEZ3 1342 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 HEG1Q9ULI3 1381 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ADD2P35612 726 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 PNOCQ13519 176 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 FBXO38Q6PIJ6 1188 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 TRMT44Q8IYL2 757 aaKnown RBP4.4□□□□□ -1.7
KTN1-217ENST00000554831 RPGRIP1Q96KN7 1286 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 KCNF1Q9H3M0 494 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 HAUS4Q9H6D7 363 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 RBM28Q9NW13 759 aaKnown RBP4.4□□□□□ -1.7
KTN1-217ENST00000554831 CDC23Q9UJX2 597 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 TCHHQ07283 1943 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 CAMSAP1Q5T5Y3 1602 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 SLFN14P0C7P3 912 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 GNA11P29992 359 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ADORA1P30542 326 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 PHKA1P46020 1223 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ADKP55263 362 aaKnown RBP4.4□□□□□ -1.7
KTN1-217ENST00000554831 TTC38Q5R3I4 469 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 CCDC122Q5T0U0 273 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 CCDC84Q86UT8 332 aaPredicted RBP4.4□□□□□ -1.7
KTN1-217ENST00000554831 VPS36Q86VN1 386 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 SPATA5Q8NB90 893 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 CLIC6Q96NY7 704 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ALS2CR12Q96Q35 445 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 NAPGQ99747 312 aaPredicted RBP4.4□□□□□ -1.7
KTN1-217ENST00000554831 LRRC27Q9C0I9 530 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ZHX3Q9H4I2 956 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ARMT1Q9H993 441 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ZSWIM5Q9P217 1185 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 MROH5Q6ZUA9 1318 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 PPLO60437 1756 aa4.4□□□□□ -1.7
KTN1-217ENST00000554831 ZC3H13Q5T200 1668 aaKnown RBP4.4□□□□□ -1.71
KTN1-217ENST00000554831 PHACTR2O75167 634 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 PRDM1O75626 825 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 PCP11498 1178 aaKnown RBP4.4□□□□□ -1.71
KTN1-217ENST00000554831 PLCD1P51178 756 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 TERF2Q15554 542 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 ZNF827Q17R98 1081 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 BPIFA3Q9BQP9 254 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.4□□□□□ -1.71
KTN1-217ENST00000554831 AGXT2Q9BYV1 514 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 PUS7LQ9H0K6 701 aaKnown RBP4.4□□□□□ -1.71
KTN1-217ENST00000554831 GJB4Q9NTQ9 266 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 BICDL2A1A5D9 508 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 ZSCAN20P17040 1043 aaPredicted RBP4.4□□□□□ -1.71
KTN1-217ENST00000554831 ASIC1P78348 528 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 UBXN1Q04323 297 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 ZNF174Q15697 407 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 WWC2Q6AWC2 1192 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 SGMS1Q86VZ5 419 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 VSTM4Q8IW00 320 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 TTLL11Q8NHH1 800 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 PPP1R13BQ96KQ4 1090 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 AIFM3Q96NN9 605 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 STRBPQ96SI9 672 aaKnown RBP4.4□□□□□ -1.71
KTN1-217ENST00000554831 TRIM34Q9BYJ4 488 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 PHLPP2Q6ZVD8 1323 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 SHTN1A0MZ66 631 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 H7C1D1 291 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 ERLIN2O94905 339 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 RHOXF2BP0C7M4 288 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 CCT6AP40227 531 aaKnown RBP4.4□□□□□ -1.71
KTN1-217ENST00000554831 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
KTN1-217ENST00000554831 LONRF3Q496Y0 759 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 CTR9Q6PD62 1173 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 PI16Q6UXB8 463 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 BICDL1Q6ZP65 573 aa4.4□□□□□ -1.71
KTN1-217ENST00000554831 ANKRD7Q92527 254 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms