RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 CRACR2BQ8N4Y2 399 aaPredicted RBP9.6□□□□□ -0.87
LINC01397-201ENST00000554808 CDCA5Q96FF9 252 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 TEPSINQ96N21 525 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 GLIS2Q9BZE0 524 aaPredicted RBP9.6□□□□□ -0.87
LINC01397-201ENST00000554808 TMEM39BQ9GZU3 492 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 CREBZFQ9NS37 354 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 GINM1Q9NU53 330 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 SERPINB13Q9UIV8 391 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
LINC01397-201ENST00000554808 PARP14Q460N5 1801 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 LOC285556D6RIA3 1793 aa9.6□□□□□ -0.87
LINC01397-201ENST00000554808 SSC5DA1L4H1 1573 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 CHGBP05060 677 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 MAP3K10Q02779 954 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 PDE4BQ07343 736 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 MAP3K11Q16584 847 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 IMMTQ16891 758 aaKnown RBP9.59□□□□□ -0.87
LINC01397-201ENST00000554808 SLFNL1Q499Z3 407 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 C12orf60Q5U649 245 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 RNF20Q5VTR2 975 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 C2orf69Q8N8R5 385 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 ZNF341Q9BYN7 854 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 RNF41Q9H4P4 317 aaPredicted RBP9.59□□□□□ -0.87
LINC01397-201ENST00000554808 EPB41L4AQ9HCS5 686 aaPredicted RBP9.59□□□□□ -0.87
LINC01397-201ENST00000554808 ANO2Q9NQ90 1003 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 ANAPC4Q9UJX5 808 aa9.59□□□□□ -0.87
LINC01397-201ENST00000554808 DDTLA6NHG4 134 aaPredicted RBP9.58□□□□□ -0.88
LINC01397-201ENST00000554808 USP17L12C9JPN9 530 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 USP17L21D6R901 530 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 ZNF213O14771 459 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 FOXN1O15353 648 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 PRKAB2O43741 272 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 FGAP02671 866 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 NBPF12Q5TAG4 269 aaPredicted RBP9.58□□□□□ -0.88
LINC01397-201ENST00000554808 CTR9Q6PD62 1173 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 MAP4K1Q92918 833 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 HHIPL1Q96JK4 782 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 CNNM2Q9H8M5 875 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC01397-201ENST00000554808 GBA2Q9HCG7 927 aaPredicted RBP9.58□□□□□ -0.88
LINC01397-201ENST00000554808 PALD1Q9ULE6 856 aa9.58□□□□□ -0.88
LINC01397-201ENST00000554808 TMEM88BA6NKF7 163 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 FOXP2O15409 715 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 CTNND1O60716 968 aaKnown RBP9.57□□□□□ -0.88
LINC01397-201ENST00000554808 CELF2O95319 508 aaKnown RBP9.57□□□□□ -0.88
LINC01397-201ENST00000554808 MCCP23508 829 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 PPARAQ07869 468 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
LINC01397-201ENST00000554808 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 VPS53Q5VIR6 699 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 C16orf86Q6ZW13 317 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 ANKRD13AQ8IZ07 590 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 CCDC17Q96LX7 622 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
LINC01397-201ENST00000554808 CSADQ9Y600 493 aa9.57□□□□□ -0.88
LINC01397-201ENST00000554808 PLIN4Q96Q06 1357 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 MINDY4BA8MYZ0 360 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 ASNSP08243 561 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 ZKSCAN1P17029 563 aaPredicted RBP9.56□□□□□ -0.88
LINC01397-201ENST00000554808 GABPAQ06546 454 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 NOL9Q5SY16 702 aaKnown RBP9.56□□□□□ -0.88
LINC01397-201ENST00000554808 TATDN1Q6P1N9 297 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 MFSD6Q6ZSS7 791 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 SH3BP5LQ7L8J4 393 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 ZFPM1Q8IX07 1006 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 STAG1Q8WVM7 1258 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 LSG1Q9H089 658 aaKnown RBP9.56□□□□□ -0.88
LINC01397-201ENST00000554808 IL25Q9H293 177 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 UPF2Q9HAU5 1272 aaKnown RBP9.56□□□□□ -0.88
LINC01397-201ENST00000554808 ZNF112Q9UJU3 913 aa9.56□□□□□ -0.88
LINC01397-201ENST00000554808 COL11A1P12107 1806 aaPredicted RBP9.55□□□□□ -0.88
LINC01397-201ENST00000554808 TRAF5O00463 557 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 ORC4O43929 436 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
LINC01397-201ENST00000554808 PLCD1P51178 756 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 PTH1RQ03431 593 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 TRDNQ13061 729 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 KRT32Q14532 448 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 CCDC178Q5BJE1 867 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 AKNAD1Q5T1N1 836 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.55□□□□□ -0.88
LINC01397-201ENST00000554808 WRNIP1Q96S55 665 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 KRT23Q9C075 422 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 ZNF408Q9H9D4 720 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 MKNK2Q9HBH9 465 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 CABP5Q9NP86 173 aa9.55□□□□□ -0.88
LINC01397-201ENST00000554808 ANGEL1Q9UNK9 670 aaKnown RBP9.55□□□□□ -0.88
LINC01397-201ENST00000554808 SCAF8Q9UPN6 1271 aaKnown RBP9.55□□□□□ -0.88
LINC01397-201ENST00000554808 RBM8AQ9Y5S9 174 aaKnown RBP9.55□□□□□ -0.88
LINC01397-201ENST00000554808 FGRP09769 529 aa9.54□□□□□ -0.88
LINC01397-201ENST00000554808 CAP2P40123 477 aa9.54□□□□□ -0.88
LINC01397-201ENST00000554808 CDK8P49336 464 aa9.54□□□□□ -0.88
LINC01397-201ENST00000554808 VEGFBP49765 207 aa9.54□□□□□ -0.88
LINC01397-201ENST00000554808 NECTIN1Q15223 517 aa9.54□□□□□ -0.88
LINC01397-201ENST00000554808 TSGA10IPQ3SY00 556 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms