RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 CEP290O15078 2479 aa17.25■□□□□ 0.35
XRCC3-207ENST00000554774 ADCY3O60266 1144 aa17.24■□□□□ 0.35
XRCC3-207ENST00000554774 FLT3LGP49771 235 aa17.24■□□□□ 0.35
XRCC3-207ENST00000554774 TREML2Q5T2D2 321 aa17.24■□□□□ 0.35
XRCC3-207ENST00000554774 PNMA3Q9UL41 463 aa17.24■□□□□ 0.35
XRCC3-207ENST00000554774 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
XRCC3-207ENST00000554774 SPP2Q13103 211 aa17.23■□□□□ 0.35
XRCC3-207ENST00000554774 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
XRCC3-207ENST00000554774 TTC39AQ5SRH9 613 aa17.23■□□□□ 0.35
XRCC3-207ENST00000554774 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
XRCC3-207ENST00000554774 ANKRD13CQ8N6S4 541 aa17.23■□□□□ 0.35
XRCC3-207ENST00000554774 SH3RF3Q8TEJ3 882 aaPredicted RBP17.23■□□□□ 0.35
XRCC3-207ENST00000554774 UNC93B1Q9H1C4 597 aa17.23■□□□□ 0.35
XRCC3-207ENST00000554774 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
XRCC3-207ENST00000554774 TAOK2Q9UL54 1235 aa17.23■□□□□ 0.35
XRCC3-207ENST00000554774 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
XRCC3-207ENST00000554774 ELNP15502 786 aa17.22■□□□□ 0.35
XRCC3-207ENST00000554774 ZKSCAN2Q63HK3 967 aa17.22■□□□□ 0.35
XRCC3-207ENST00000554774 NAA16Q6N069 864 aaPredicted RBP17.22■□□□□ 0.35
XRCC3-207ENST00000554774 PROCA1Q8NCQ7 364 aaPredicted RBP17.22■□□□□ 0.35
XRCC3-207ENST00000554774 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
XRCC3-207ENST00000554774 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.35
XRCC3-207ENST00000554774 INHAP05111 366 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 CAP2P40123 477 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 HMGCS2P54868 508 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.35
XRCC3-207ENST00000554774 TNNI3KQ59H18 835 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 U2AF1L4Q8WU68 220 aaKnown RBP17.21■□□□□ 0.35
XRCC3-207ENST00000554774 COA7Q96BR5 231 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 HTATIP2Q9BUP3 242 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 TBC1D2Q9BYX2 928 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 DOCK3Q8IZD9 2030 aa17.21■□□□□ 0.35
XRCC3-207ENST00000554774 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 USP17L5A8MUK1 530 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 BAG3O95817 575 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 PABPC4Q13310 644 aaKnown RBP eCLIP17.2■□□□□ 0.34
XRCC3-207ENST00000554774 IRF5Q13568 498 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 POLA2Q14181 598 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 FAM110CQ1W6H9 321 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 UBE2Q1Q7Z7E8 422 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 PXYLP1Q8TE99 480 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 DBNDD2Q9BQY9 259 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
XRCC3-207ENST00000554774 HERC5Q9UII4 1024 aaKnown RBP17.2■□□□□ 0.34
XRCC3-207ENST00000554774 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
XRCC3-207ENST00000554774 FARP2O94887 1054 aaPredicted RBP17.19■□□□□ 0.34
XRCC3-207ENST00000554774 SGPL1O95470 568 aa17.19■□□□□ 0.34
XRCC3-207ENST00000554774 PLCG2P16885 1265 aa17.19■□□□□ 0.34
XRCC3-207ENST00000554774 MAPKAPK5Q8IW41 473 aa17.19■□□□□ 0.34
XRCC3-207ENST00000554774 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
XRCC3-207ENST00000554774 DHX36Q9H2U1 1008 aaKnown RBP17.19■□□□□ 0.34
XRCC3-207ENST00000554774 C1orf115Q9H7X2 142 aa17.19■□□□□ 0.34
XRCC3-207ENST00000554774 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
XRCC3-207ENST00000554774 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
XRCC3-207ENST00000554774 TFRCP02786 760 aaKnown RBP17.18■□□□□ 0.34
XRCC3-207ENST00000554774 GCLCP48506 637 aaPredicted RBP17.18■□□□□ 0.34
XRCC3-207ENST00000554774 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
XRCC3-207ENST00000554774 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
XRCC3-207ENST00000554774 DEFB118Q96PH6 123 aa17.18■□□□□ 0.34
XRCC3-207ENST00000554774 TRIM34Q9BYJ4 488 aa17.18■□□□□ 0.34
XRCC3-207ENST00000554774 ASCC2Q9H1I8 757 aaPredicted RBP17.18■□□□□ 0.34
XRCC3-207ENST00000554774 SIPA1L1O43166 1804 aa17.18■□□□□ 0.34
XRCC3-207ENST00000554774 CDK5RAP2Q96SN8 1893 aa17.18■□□□□ 0.34
XRCC3-207ENST00000554774 CYP2E1P05181 493 aaPredicted RBP17.17■□□□□ 0.34
XRCC3-207ENST00000554774 PPP4CP60510 307 aa17.17■□□□□ 0.34
XRCC3-207ENST00000554774 SH3D19Q5HYK7 790 aa17.17■□□□□ 0.34
XRCC3-207ENST00000554774 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
XRCC3-207ENST00000554774 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
XRCC3-207ENST00000554774 CRACR2BQ8N4Y2 399 aaPredicted RBP17.17■□□□□ 0.34
XRCC3-207ENST00000554774 TRIOBPQ9H2D6 2365 aa17.17■□□□□ 0.34
XRCC3-207ENST00000554774 FLT1P17948 1338 aa17.17■□□□□ 0.34
XRCC3-207ENST00000554774 ZAP70P43403 619 aa17.16■□□□□ 0.34
XRCC3-207ENST00000554774 MTMR2Q13614 643 aa17.16■□□□□ 0.34
XRCC3-207ENST00000554774 WDR18Q9BV38 432 aa17.16■□□□□ 0.34
XRCC3-207ENST00000554774 TMOD4Q9NZQ9 345 aa17.16■□□□□ 0.34
XRCC3-207ENST00000554774 NR2E3Q9Y5X4 410 aa17.16■□□□□ 0.34
XRCC3-207ENST00000554774 FOCADQ5VW36 1801 aa17.16■□□□□ 0.34
XRCC3-207ENST00000554774 RANBP2P49792 3224 aaKnown RBP17.15■□□□□ 0.34
XRCC3-207ENST00000554774 GDF11O95390 407 aa17.15■□□□□ 0.34
XRCC3-207ENST00000554774 ASNSP08243 561 aa17.15■□□□□ 0.34
XRCC3-207ENST00000554774 IRX3P78415 501 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-207ENST00000554774 FOXP4Q8IVH2 680 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-207ENST00000554774 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
XRCC3-207ENST00000554774 CCDC8Q9H0W5 538 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-207ENST00000554774 PIH1D3Q9NQM4 214 aaKnown RBP17.15■□□□□ 0.34
XRCC3-207ENST00000554774 PAK6Q9NQU5 681 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-207ENST00000554774 SAP30BPQ9UHR5 308 aaKnown RBP17.15■□□□□ 0.34
XRCC3-207ENST00000554774 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
XRCC3-207ENST00000554774 CAPN2P17655 700 aa17.14■□□□□ 0.33
XRCC3-207ENST00000554774 BACE1P56817 501 aa17.14■□□□□ 0.33
XRCC3-207ENST00000554774 DYNLL1P63167 89 aaKnown RBP17.14■□□□□ 0.33
XRCC3-207ENST00000554774 JAG1P78504 1218 aa17.14■□□□□ 0.33
XRCC3-207ENST00000554774 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-207ENST00000554774 ZNF512BQ96KM6 892 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-207ENST00000554774 DNAJC18Q9H819 358 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms