RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 GREM1O60565 184 aa7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 RAPGEF3O95398 923 aa7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 LIG1P18858 919 aa7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 APOBRQ0VD83 1088 aa7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 FAM196AQ6ZSG2 479 aa7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 GAL3ST3Q96A11 431 aa7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 NOP53Q9NZM5 478 aaKnown RBP7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 PPP1R1BQ9UD71 204 aaPredicted RBP7.37□□□□□ -1.23
MTHFD1-206ENST00000554353 NUP153P49790 1475 aaKnown RBP7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 FHOD3Q2V2M9 1422 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 PHLDB1Q86UU1 1377 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 WISP1O95388 367 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 BPNT1O95861 308 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 DLGAP3O95886 979 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 GJA8P48165 433 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 ACAD11Q709F0 780 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 CCDC84Q86UT8 332 aaPredicted RBP7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 SLC43A3Q8NBI5 491 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 SREK1Q8WXA9 508 aaKnown RBP7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 GATAD2BQ8WXI9 593 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 WDR89Q96FK6 387 aaPredicted RBP7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 NT5C1AQ9BXI3 368 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 KCNQ5Q9NR82 932 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 RAD18Q9NS91 495 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 KRT82Q9NSB4 513 aa7.36□□□□□ -1.23
MTHFD1-206ENST00000554353 ZNF862O60290 1169 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 ADAM23O75077 832 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 ELNP15502 786 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 CRKP46108 304 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 ARID5AQ03989 594 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 GRIK4Q16099 956 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 HP1BP3Q5SSJ5 553 aaPredicted RBP7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 NKD1Q969G9 470 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 RUSC1Q9BVN2 902 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 TANGO6Q9C0B7 1094 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 NEO1Q92859 1461 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 ADAMTSL3P82987 1691 aa7.35□□□□□ -1.23
MTHFD1-206ENST00000554353 FAM221AA4D161 298 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 PLEKHD1A6NEE1 506 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 CDK8P49336 464 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 SF3A1Q15459 793 aaKnown RBP7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 IGF2-ASQ6U949 168 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 PRKAG2Q9UGJ0 569 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 EFR3BQ9Y2G0 817 aa7.34□□□□□ -1.23
MTHFD1-206ENST00000554353 RICTORQ6R327 1708 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 CILPO75339 1184 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 SLFN14P0C7P3 912 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 MCM4P33991 863 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 RPL6Q02878 288 aaKnown RBP7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 MPP2Q14168 576 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 CWF19L2Q2TBE0 894 aaKnown RBP7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 AKAP4Q5JQC9 854 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 EXOSC6Q5RKV6 272 aaKnown RBP7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 RASGRP4Q8TDF6 673 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 ELMO3Q96BJ8 720 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 SCARF2Q96GP6 870 aaPredicted RBP7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 WDR18Q9BV38 432 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 GINM1Q9NU53 330 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 CACNA2D2Q9NY47 1150 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 USP21Q9UK80 565 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 FRMPD1Q5SYB0 1578 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
MTHFD1-206ENST00000554353 BCORL1Q5H9F3 1711 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 EFCAB5A4FU69 1503 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 ARID4BQ4LE39 1312 aaPredicted RBP7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 DCDC2CA8MYV0 355 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 AOC2O75106 756 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 ATF4P18848 351 aaPredicted RBP7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 NASPP49321 788 aaPredicted RBP7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 INPP5AQ14642 412 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 WIPI1Q5MNZ9 446 aaPredicted RBP7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 NUTM2GQ5VZR2 741 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 LRFN4Q6PJG9 635 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 KIAA1211Q6ZU35 1233 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 AGGF1Q8N302 714 aaeCLIP7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 SPATA32Q96LK8 384 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 CSADQ9Y600 493 aa7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.32□□□□□ -1.24
MTHFD1-206ENST00000554353 PTPRMP28827 1452 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 MADDQ8WXG6 1647 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 GRIN3BO60391 1043 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 SPATA31C1P0DKV0 1188 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 KIF4BQ2VIQ3 1234 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 TTC37Q6PGP7 1564 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 HDXQ7Z353 690 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 REC114Q7Z4M0 266 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 AKNAQ7Z591 1439 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 C12orf40Q86WS4 652 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 SLITRK4Q8IW52 837 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 PLPPR2Q96GM1 343 aa7.31□□□□□ -1.24
MTHFD1-206ENST00000554353 LRRC3Q9BY71 257 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms