RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 SMCR8Q8TEV9 937 aaPredicted RBP22.97■■□□□ 1.27
CPSF2-203ENST00000554290 AATFQ9NY61 560 aaKnown RBP eCLIP22.97■■□□□ 1.27
CPSF2-203ENST00000554290 PI4KBQ9UBF8 816 aa22.97■■□□□ 1.27
CPSF2-203ENST00000554290 AGTPBP1Q9UPW5 1226 aa22.97■■□□□ 1.27
CPSF2-203ENST00000554290 MYPNQ86TC9 1320 aa22.97■■□□□ 1.27
CPSF2-203ENST00000554290 GRK4P32298 578 aa22.96■■□□□ 1.27
CPSF2-203ENST00000554290 CAP2P40123 477 aa22.96■■□□□ 1.27
CPSF2-203ENST00000554290 CCDC84Q86UT8 332 aaPredicted RBP22.96■■□□□ 1.27
CPSF2-203ENST00000554290 GCC1Q96CN9 775 aa22.96■■□□□ 1.27
CPSF2-203ENST00000554290 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.96■■□□□ 1.27
CPSF2-203ENST00000554290 ZBED9Q6R2W3 1325 aa22.96■■□□□ 1.27
CPSF2-203ENST00000554290 ZSWIM8A7E2V4 1837 aa22.96■■□□□ 1.27
CPSF2-203ENST00000554290 ZAP70P43403 619 aa22.95■■□□□ 1.26
CPSF2-203ENST00000554290 SPP2Q13103 211 aa22.95■■□□□ 1.26
CPSF2-203ENST00000554290 DOCK1Q14185 1865 aa22.95■■□□□ 1.26
CPSF2-203ENST00000554290 PROCA1Q8NCQ7 364 aaPredicted RBP22.95■■□□□ 1.26
CPSF2-203ENST00000554290 ZNF280CQ8ND82 737 aa22.95■■□□□ 1.26
CPSF2-203ENST00000554290 DBNLQ9UJU6 430 aaKnown RBP22.95■■□□□ 1.26
CPSF2-203ENST00000554290 PNMA3Q9UL41 463 aa22.95■■□□□ 1.26
CPSF2-203ENST00000554290 KIAA0100Q14667 2235 aaKnown RBP22.94■■□□□ 1.26
CPSF2-203ENST00000554290 USP17L5A8MUK1 530 aa22.94■■□□□ 1.26
CPSF2-203ENST00000554290 CEP85Q6P2H3 762 aa22.94■■□□□ 1.26
CPSF2-203ENST00000554290 ERC1Q8IUD2 1116 aa22.94■■□□□ 1.26
CPSF2-203ENST00000554290 CCDC8Q9H0W5 538 aaPredicted RBP22.94■■□□□ 1.26
CPSF2-203ENST00000554290 BIN2Q9UBW5 565 aaPredicted RBP22.94■■□□□ 1.26
CPSF2-203ENST00000554290 MS4A1P11836 297 aa22.93■■□□□ 1.26
CPSF2-203ENST00000554290 PABPC4Q13310 644 aaKnown RBP eCLIP22.93■■□□□ 1.26
CPSF2-203ENST00000554290 TGFBRAP1Q8WUH2 860 aa22.93■■□□□ 1.26
CPSF2-203ENST00000554290 EAF2Q96CJ1 260 aaPredicted RBP22.93■■□□□ 1.26
CPSF2-203ENST00000554290 TRIM34Q9BYJ4 488 aa22.93■■□□□ 1.26
CPSF2-203ENST00000554290 AS3MTQ9HBK9 375 aa22.93■■□□□ 1.26
CPSF2-203ENST00000554290 UBXN2AP68543 259 aa22.92■■□□□ 1.26
CPSF2-203ENST00000554290 PRKCZQ05513 592 aa22.92■■□□□ 1.26
CPSF2-203ENST00000554290 ADGRA1Q86SQ6 560 aa22.92■■□□□ 1.26
CPSF2-203ENST00000554290 FOXP4Q8IVH2 680 aaPredicted RBP22.92■■□□□ 1.26
CPSF2-203ENST00000554290 MAPKAPK5Q8IW41 473 aa22.92■■□□□ 1.26
CPSF2-203ENST00000554290 PIH1D3Q9NQM4 214 aaKnown RBP22.92■■□□□ 1.26
CPSF2-203ENST00000554290 TLR7Q9NYK1 1049 aaKnown RBP22.92■■□□□ 1.26
CPSF2-203ENST00000554290 MTFR1Q15390 333 aa22.91■■□□□ 1.26
CPSF2-203ENST00000554290 HSP90AB4PQ58FF6 505 aa22.91■■□□□ 1.26
CPSF2-203ENST00000554290 TREML2Q5T2D2 321 aa22.91■■□□□ 1.26
CPSF2-203ENST00000554290 CERS3Q8IU89 383 aa22.91■■□□□ 1.26
CPSF2-203ENST00000554290 CRACR2BQ8N4Y2 399 aaPredicted RBP22.91■■□□□ 1.26
CPSF2-203ENST00000554290 SLAIN1Q8ND83 568 aa22.91■■□□□ 1.26
CPSF2-203ENST00000554290 NKX2-3Q8TAU0 364 aa22.91■■□□□ 1.26
CPSF2-203ENST00000554290 PANK1Q8TE04 598 aa22.91■■□□□ 1.26
CPSF2-203ENST00000554290 FLT1P17948 1338 aa22.9■■□□□ 1.26
CPSF2-203ENST00000554290 TNPO2O14787 897 aaKnown RBP22.9■■□□□ 1.26
CPSF2-203ENST00000554290 IDH1O75874 414 aaKnown RBP22.9■■□□□ 1.26
CPSF2-203ENST00000554290 ASNSP08243 561 aa22.9■■□□□ 1.26
CPSF2-203ENST00000554290 CYP7A1P22680 504 aa22.9■■□□□ 1.26
CPSF2-203ENST00000554290 HMGCS2P54868 508 aa22.9■■□□□ 1.26
CPSF2-203ENST00000554290 RRP1BQ14684 758 aaKnown RBP22.9■■□□□ 1.26
CPSF2-203ENST00000554290 GABRQQ9UN88 632 aa22.9■■□□□ 1.26
CPSF2-203ENST00000554290 EXOC6BQ9Y2D4 811 aa22.9■■□□□ 1.26
CPSF2-203ENST00000554290 CENPFP49454 3210 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 HLA-DOAP06340 250 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 GCLCP48506 637 aaPredicted RBP22.89■■□□□ 1.25
CPSF2-203ENST00000554290 SH3D19Q5HYK7 790 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 TMED8Q6PL24 325 aaPredicted RBP22.89■■□□□ 1.25
CPSF2-203ENST00000554290 METTL16Q86W50 562 aaKnown RBP22.89■■□□□ 1.25
CPSF2-203ENST00000554290 ANKRD13CQ8N6S4 541 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 WDR18Q9BV38 432 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 GINM1Q9NU53 330 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 PALD1Q9ULE6 856 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 PHIPQ8WWQ0 1821 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 MAST2Q6P0Q8 1798 aa22.89■■□□□ 1.25
CPSF2-203ENST00000554290 CCL5P13501 91 aa22.88■■□□□ 1.25
CPSF2-203ENST00000554290 FAM110CQ1W6H9 321 aa22.88■■□□□ 1.25
CPSF2-203ENST00000554290 AACSQ86V21 672 aa22.88■■□□□ 1.25
CPSF2-203ENST00000554290 COA7Q96BR5 231 aa22.88■■□□□ 1.25
CPSF2-203ENST00000554290 RNF208Q9H0X6 261 aa22.88■■□□□ 1.25
CPSF2-203ENST00000554290 ADCY3O60266 1144 aa22.87■■□□□ 1.25
CPSF2-203ENST00000554290 GJB1P08034 283 aa22.87■■□□□ 1.25
CPSF2-203ENST00000554290 FLT3LGP49771 235 aa22.87■■□□□ 1.25
CPSF2-203ENST00000554290 DYNLL1P63167 89 aaKnown RBP22.87■■□□□ 1.25
CPSF2-203ENST00000554290 MAP3K12Q12852 859 aa22.87■■□□□ 1.25
CPSF2-203ENST00000554290 PXYLP1Q8TE99 480 aa22.87■■□□□ 1.25
CPSF2-203ENST00000554290 PTPRFP10586 1907 aa22.86■■□□□ 1.25
CPSF2-203ENST00000554290 IRF5Q13568 498 aa22.86■■□□□ 1.25
CPSF2-203ENST00000554290 ASCC2Q9H1I8 757 aaPredicted RBP22.86■■□□□ 1.25
CPSF2-203ENST00000554290 TMOD4Q9NZQ9 345 aa22.86■■□□□ 1.25
CPSF2-203ENST00000554290 SAP30BPQ9UHR5 308 aaKnown RBP22.86■■□□□ 1.25
CPSF2-203ENST00000554290 USP5P45974 858 aa22.85■■□□□ 1.25
CPSF2-203ENST00000554290 GJA8P48165 433 aa22.85■■□□□ 1.25
CPSF2-203ENST00000554290 BACE1P56817 501 aa22.85■■□□□ 1.25
CPSF2-203ENST00000554290 MTMR2Q13614 643 aa22.85■■□□□ 1.25
CPSF2-203ENST00000554290 MAGEB6Q8N7X4 407 aa22.85■■□□□ 1.25
CPSF2-203ENST00000554290 MIGA1Q8NAN2 632 aa22.85■■□□□ 1.25
CPSF2-203ENST00000554290 DNAJC18Q9H819 358 aa22.85■■□□□ 1.25
CPSF2-203ENST00000554290 C19orf81C9J6K1 198 aa22.84■■□□□ 1.25
CPSF2-203ENST00000554290 RPAP2Q8IXW5 612 aaPredicted RBP22.84■■□□□ 1.25
CPSF2-203ENST00000554290 RHPN1Q8TCX5 695 aa22.84■■□□□ 1.25
CPSF2-203ENST00000554290 SHISA4Q96DD7 197 aa22.84■■□□□ 1.25
CPSF2-203ENST00000554290 NDUFB9Q9Y6M9 179 aa22.84■■□□□ 1.25
CPSF2-203ENST00000554290 USP17L10C9JJH3 530 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 HMMRO75330 724 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 GDF11O95390 407 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 ELNP15502 786 aa22.83■■□□□ 1.25
CPSF2-203ENST00000554290 IRX3P78415 501 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms