RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 FGD1P98174 961 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 GABPAQ06546 454 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 NFIAQ12857 509 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 PICALMQ13492 652 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 TNFAIP1Q13829 316 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
TDP1-209ENST00000554180 CCDC178Q5BJE1 867 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 Q6ZUG5 572 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 FAM83AQ86UY5 434 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 TMX3Q96JJ7 454 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 TDRD3Q9H7E2 651 aaKnown RBP9.02□□□□□ -0.97
TDP1-209ENST00000554180 FAM198AQ9UFP1 575 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.97
TDP1-209ENST00000554180 SERPINB13Q9UIV8 391 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 ANGEL1Q9UNK9 670 aaKnown RBP9.02□□□□□ -0.97
TDP1-209ENST00000554180 PCDHAC2Q9Y5I4 1007 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 TACC3Q9Y6A5 838 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 CDK5RAP2Q96SN8 1893 aa9.02□□□□□ -0.97
TDP1-209ENST00000554180 BAZ2AQ9UIF9 1905 aaKnown RBP9.01□□□□□ -0.97
TDP1-209ENST00000554180 UTRNP46939 3433 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 ERICH2A1L162 156 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
TDP1-209ENST00000554180 LIFRP42702 1097 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 TNNI2P48788 182 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 PLCD1P51178 756 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 RCAN1P53805 252 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 COL9A3Q14050 684 aaPredicted RBP9.01□□□□□ -0.97
TDP1-209ENST00000554180 KIF4BQ2VIQ3 1234 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 DPY19L2Q6NUT2 758 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 METTL16Q86W50 562 aaKnown RBP9.01□□□□□ -0.97
TDP1-209ENST00000554180 IQCA1Q86XH1 822 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 TMTC2Q8N394 836 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 FAM151AQ8WW52 585 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 CHMP4CQ96CF2 233 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 INTS4Q96HW7 963 aaKnown RBP9.01□□□□□ -0.97
TDP1-209ENST00000554180 L3MBTL3Q96JM7 780 aaPredicted RBP9.01□□□□□ -0.97
TDP1-209ENST00000554180 UBAC1Q9BSL1 405 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 TOMM22Q9NS69 142 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 ZSWIM5Q9P217 1185 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 SAP30BPQ9UHR5 308 aaKnown RBP9.01□□□□□ -0.97
TDP1-209ENST00000554180 ECM29Q5VYK3 1845 aa9.01□□□□□ -0.97
TDP1-209ENST00000554180 PLIN4Q96Q06 1357 aa9□□□□□ -0.97
TDP1-209ENST00000554180 SH2B2O14492 632 aaPredicted RBP9□□□□□ -0.97
TDP1-209ENST00000554180 RANBP6O60518 1105 aaKnown RBP9□□□□□ -0.97
TDP1-209ENST00000554180 HSP90AA1P07900 732 aaKnown RBP9□□□□□ -0.97
TDP1-209ENST00000554180 CDK8P49336 464 aa9□□□□□ -0.97
TDP1-209ENST00000554180 CACNB3P54284 484 aa9□□□□□ -0.97
TDP1-209ENST00000554180 CUL4AQ13619 759 aa9□□□□□ -0.97
TDP1-209ENST00000554180 NBPF9Q3BBW0 867 aa9□□□□□ -0.97
TDP1-209ENST00000554180 RRP12Q5JTH9 1297 aaKnown RBP9□□□□□ -0.97
TDP1-209ENST00000554180 CYB5R4Q7L1T6 521 aa9□□□□□ -0.97
TDP1-209ENST00000554180 FOXP4Q8IVH2 680 aaPredicted RBP9□□□□□ -0.97
TDP1-209ENST00000554180 BRF1Q92994 677 aa9□□□□□ -0.97
TDP1-209ENST00000554180 ZNF274Q96GC6 653 aaPredicted RBP9□□□□□ -0.97
TDP1-209ENST00000554180 TCEANC2Q96MN5 208 aa9□□□□□ -0.97
TDP1-209ENST00000554180 MKNK2Q9HBH9 465 aa9□□□□□ -0.97
TDP1-209ENST00000554180 TCP11L1Q9NUJ3 509 aa9□□□□□ -0.97
TDP1-209ENST00000554180 HERC5Q9UII4 1024 aaKnown RBP9□□□□□ -0.97
TDP1-209ENST00000554180 CNTNAP1P78357 1384 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 SHTN1A0MZ66 631 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 CLRN2A0PK11 232 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 DDTLA6NHG4 134 aaPredicted RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 TSPY2A6NKD2 308 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 SMIM22K7EJ46 135 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 IFIT3O14879 490 aaKnown RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 PRDM1O75626 825 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 RASA1P20936 1047 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 EVX2Q03828 476 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 TCP10Q12799 353 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 TBC1D10BQ4KMP7 808 aaPredicted RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 TMEM67Q5HYA8 995 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 PPP4R3BQ5MIZ7 849 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 SAMD7Q7Z3H4 446 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 APOBEC3FQ8IUX4 373 aaKnown RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 ZSCAN29Q8IWY8 852 aaPredicted RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 ZNF444Q8N0Y2 327 aaPredicted RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 IGDCC4Q8TDY8 1250 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 DYNLL2Q96FJ2 89 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 CCDC17Q96LX7 622 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 CSRNP1Q96S65 589 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 LRRC2Q9BYS8 371 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 LY9Q9HBG7 655 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 INCENPQ9NQS7 918 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 ADARB2Q9NS39 739 aaKnown RBP8.99□□□□□ -0.97
TDP1-209ENST00000554180 TPCN1Q9ULQ1 816 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 PPP2R3BQ9Y5P8 575 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 MYH1P12882 1939 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 TNKSO95271 1327 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 PITPNM2Q9BZ72 1349 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 NID2Q14112 1375 aa8.99□□□□□ -0.97
TDP1-209ENST00000554180 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 TCP10L2B9ZVM9 353 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 TBC1D12O60347 775 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 PFKFB2O60825 505 aa8.98□□□□□ -0.97
TDP1-209ENST00000554180 DDNO94850 711 aaPredicted RBP8.98□□□□□ -0.97
TDP1-209ENST00000554180 EGFRP00533 1210 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms