RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PPM1JQ5JR12 505 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 MAP1SQ66K74 1059 aaPredicted RBP5.09□□□□□ -1.59
SRP54-204ENST00000553923 LILRA6Q6PI73 481 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 PI16Q6UXB8 463 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 SYDE1Q6ZW31 735 aaPredicted RBP5.09□□□□□ -1.59
SRP54-204ENST00000553923 AMIGO3Q86WK7 504 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 LRRC56Q8IYG6 542 aaPredicted RBP5.09□□□□□ -1.59
SRP54-204ENST00000553923 ALKBH8Q96BT7 664 aaKnown RBP5.09□□□□□ -1.59
SRP54-204ENST00000553923 PPP1R16BQ96T49 567 aa5.09□□□□□ -1.59
SRP54-204ENST00000553923 XRCC5P13010 732 aaKnown RBP5.08□□□□□ -1.6
SRP54-204ENST00000553923 BMP6P22004 513 aa5.08□□□□□ -1.6
SRP54-204ENST00000553923 HNRNPUQ00839 825 aaKnown RBP eCLIP5.08□□□□□ -1.6
SRP54-204ENST00000553923 TTLL10Q6ZVT0 673 aa5.08□□□□□ -1.6
SRP54-204ENST00000553923 ZSCAN18Q8TBC5 510 aaPredicted RBP5.08□□□□□ -1.6
SRP54-204ENST00000553923 NCANO14594 1321 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 ZSCAN22P10073 491 aaPredicted RBP5.07□□□□□ -1.6
SRP54-204ENST00000553923 GDNFP39905 211 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 CYFIP1Q7L576 1253 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 ANKLE2Q86XL3 938 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 GRIN3AQ8TCU5 1115 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 KIRREL1Q96J84 757 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 EMILIN2Q9BXX0 1053 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 BCO2Q9BYV7 579 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 CARS2Q9HA77 564 aaKnown RBP5.07□□□□□ -1.6
SRP54-204ENST00000553923 RAPGEFL1Q9UHV5 662 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 CSADQ9Y600 493 aa5.07□□□□□ -1.6
SRP54-204ENST00000553923 PRRG2O14669 202 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 FANCGO15287 622 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 SLITRK5O94991 958 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 C22orf34Q6ZV56 151 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 TXNDC2Q86VQ3 553 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 C12orf40Q86WS4 652 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 C3orf58Q8NDZ4 430 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 NECAB3Q96P71 396 aaPredicted RBP5.06□□□□□ -1.6
SRP54-204ENST00000553923 RBCK1Q9BYM8 510 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 C1orf115Q9H7X2 142 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 MAPK8IP1Q9UQF2 711 aa5.06□□□□□ -1.6
SRP54-204ENST00000553923 DCDC2CA8MYV0 355 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 PRR33A8MZF0 331 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 RBAK-RBAKDNI3L0D1 243 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 TMEM67Q5HYA8 995 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 ZBTB37Q5TC79 503 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 RASIP1Q5U651 963 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 DMRTB1Q96MA1 342 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 HSPA12BQ96MM6 686 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 FOXQ1Q9C009 403 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 ATP13A1Q9HD20 1204 aa5.05□□□□□ -1.6
SRP54-204ENST00000553923 GNAT3A8MTJ3 354 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 ENC1O14682 589 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 PAGE1O75459 146 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 TRIM37O94972 964 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 NXPE4Q6UWF7 544 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 ARMCX6Q7L4S7 300 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 NPAS4Q8IUM7 802 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 FBXO15Q8NCQ5 510 aaPredicted RBP5.04□□□□□ -1.6
SRP54-204ENST00000553923 CD320Q9NPF0 282 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 PRDM5Q9NQX1 630 aaPredicted RBP5.04□□□□□ -1.6
SRP54-204ENST00000553923 PPP4R2Q9NY27 417 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 USTQ9Y2C2 406 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 AKAP2Q9Y2D5 859 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 ST14Q9Y5Y6 855 aa5.04□□□□□ -1.6
SRP54-204ENST00000553923 B8ZZF3 427 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 LRIG2O94898 1065 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 MED14OSP0DP75 135 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 SLBPQ14493 270 aaKnown RBP eCLIP5.03□□□□□ -1.6
SRP54-204ENST00000553923 MPZL3Q6UWV2 235 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 TMC1Q8TDI8 760 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 ACSBG1Q96GR2 724 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 KCNK12Q9HB15 430 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 CBX8Q9HC52 389 aa5.03□□□□□ -1.6
SRP54-204ENST00000553923 BUD31P41223 144 aaPredicted RBP5.02□□□□□ -1.61
SRP54-204ENST00000553923 B4GALNT3Q6L9W6 998 aa5.02□□□□□ -1.61
SRP54-204ENST00000553923 KCT2Q8NC54 265 aa5.02□□□□□ -1.61
SRP54-204ENST00000553923 RIN3Q8TB24 985 aa5.02□□□□□ -1.61
SRP54-204ENST00000553923 NSUN3Q9H649 340 aaKnown RBP5.02□□□□□ -1.61
SRP54-204ENST00000553923 FBRSQ9HAH7 460 aa5.02□□□□□ -1.61
SRP54-204ENST00000553923 NLRP2Q9NX02 1062 aa5.02□□□□□ -1.61
SRP54-204ENST00000553923 CAPN6Q9Y6Q1 641 aa5.02□□□□□ -1.61
SRP54-204ENST00000553923 NPIPB6E9PJ23 425 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 NFIBO00712 420 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 CAP2P40123 477 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 DSC3Q14574 896 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 INPP5AQ14642 412 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.01□□□□□ -1.61
SRP54-204ENST00000553923 SCARA3Q6AZY7 606 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 TMC7Q7Z402 723 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 ANKRD24Q8TF21 1146 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 DIRC2Q96SL1 478 aa5.01□□□□□ -1.61
SRP54-204ENST00000553923 H3BS24 57 aa5□□□□□ -1.61
SRP54-204ENST00000553923 GLDCP23378 1020 aa5□□□□□ -1.61
SRP54-204ENST00000553923 PTPN11Q06124 597 aaPredicted RBP5□□□□□ -1.61
SRP54-204ENST00000553923 KCNA10Q16322 511 aa5□□□□□ -1.61
SRP54-204ENST00000553923 NKG7Q16617 165 aa5□□□□□ -1.61
SRP54-204ENST00000553923 SFRP5Q5T4F7 317 aa5□□□□□ -1.61
SRP54-204ENST00000553923 CDC37L1Q7L3B6 337 aa5□□□□□ -1.61
SRP54-204ENST00000553923 THAP5Q7Z6K1 395 aa5□□□□□ -1.61
SRP54-204ENST00000553923 MFSD4AQ8N468 514 aa5□□□□□ -1.61
SRP54-204ENST00000553923 ZNF507Q8TCN5 953 aa5□□□□□ -1.61
SRP54-204ENST00000553923 C20orf173Q96LM9 149 aa5□□□□□ -1.61
SRP54-204ENST00000553923 ALPK1Q96QP1 1244 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms