RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PUS7LQ9H0K6 701 aaKnown RBP11.23□□□□□ -0.61
CHD8-206ENST00000553870 EHD4Q9H223 541 aa11.23□□□□□ -0.61
CHD8-206ENST00000553870 ARMT1Q9H993 441 aa11.23□□□□□ -0.61
CHD8-206ENST00000553870 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHD8-206ENST00000553870 DCP1AQ9NPI6 582 aaPredicted RBP11.23□□□□□ -0.61
CHD8-206ENST00000553870 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
CHD8-206ENST00000553870 AK9Q5TCS8 1911 aa11.23□□□□□ -0.61
CHD8-206ENST00000553870 CEP350Q5VT06 3117 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 TRIM6-TRIM34B2RNG4 842 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 POLR3DP05423 398 aaPredicted RBP11.22□□□□□ -0.61
CHD8-206ENST00000553870 GTF2A2P52657 109 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 AMOTL1Q8IY63 956 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 CRACR2BQ8N4Y2 399 aaPredicted RBP11.22□□□□□ -0.61
CHD8-206ENST00000553870 ZKSCAN4Q969J2 545 aaPredicted RBP11.22□□□□□ -0.61
CHD8-206ENST00000553870 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 TRIM34Q9BYJ4 488 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 TBC1D2Q9BYX2 928 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 PICK1Q9NRD5 415 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 HELLSQ9NRZ9 838 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 SERPINB13Q9UIV8 391 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 SNCAIPQ9Y6H5 919 aa11.22□□□□□ -0.61
CHD8-206ENST00000553870 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
CHD8-206ENST00000553870 HIP1O00291 1037 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 ALDH1A1P00352 501 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 INPP5BP32019 993 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 CAP2P40123 477 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 PPIL2Q13356 520 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 SLFNL1Q499Z3 407 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 OTUD7BQ6GQQ9 843 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 SCYL3Q8IZE3 742 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 OPTNQ96CV9 577 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 ZIC5Q96T25 663 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 SAGE1Q9NXZ1 904 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 SLC4A4Q9Y6R1 1079 aa11.21□□□□□ -0.61
CHD8-206ENST00000553870 PATL2C9JE40 543 aaKnown RBP11.2□□□□□ -0.62
CHD8-206ENST00000553870 CXCL11O14625 94 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 GPAA1O43292 621 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 CHGBP05060 677 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 HSPA1AP0DMV8 641 aaKnown RBP11.2□□□□□ -0.62
CHD8-206ENST00000553870 HSPA1BP0DMV9 641 aaKnown RBP11.2□□□□□ -0.62
CHD8-206ENST00000553870 PDE4AP27815 886 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 TATDN1Q6P1N9 297 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 SDR42E1Q8WUS8 393 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 RILPL2Q969X0 211 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 SWAP70Q9UH65 585 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
CHD8-206ENST00000553870 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
CHD8-206ENST00000553870 MYH7P12883 1935 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 GSG1L2A8MUP6 293 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 PRKAB2O43741 272 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 ASNSP08243 561 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 CETPP11597 493 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 PTPRAP18433 802 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 SDSP20132 328 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 GJA5P36382 358 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 CTCFP49711 727 aaPredicted RBP11.19□□□□□ -0.62
CHD8-206ENST00000553870 PLCD1P51178 756 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
CHD8-206ENST00000553870 GABPAQ06546 454 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 SNAPC2Q13487 334 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 TTC22Q5TAA0 569 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 C12orf60Q5U649 245 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 ARPP21Q9UBL0 812 aaPredicted RBP11.19□□□□□ -0.62
CHD8-206ENST00000553870 KCNH4Q9UQ05 1017 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 ZHX2Q9Y6X8 837 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 FOCADQ5VW36 1801 aa11.19□□□□□ -0.62
CHD8-206ENST00000553870 USP17L5A8MUK1 530 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 USP17L12C9JPN9 530 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 USP17L21D6R901 530 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 M0R2C6 588 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 IRF6O14896 467 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 MKRN3Q13064 507 aaKnown RBP11.18□□□□□ -0.62
CHD8-206ENST00000553870 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 AS3MTQ9HBK9 375 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 ZCCHC17Q9NP64 241 aaKnown RBP11.18□□□□□ -0.62
CHD8-206ENST00000553870 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
CHD8-206ENST00000553870 CDK5RAP2Q96SN8 1893 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 APPP05067 770 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 ALX1Q15699 326 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 CERKLQ49MI3 558 aaPredicted RBP11.17□□□□□ -0.62
CHD8-206ENST00000553870 NOM1Q5C9Z4 860 aaKnown RBP11.17□□□□□ -0.62
CHD8-206ENST00000553870 CTR9Q6PD62 1173 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 FASTKD5Q7L8L6 764 aaKnown RBP11.17□□□□□ -0.62
CHD8-206ENST00000553870 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 IFNL3Q8IZI9 196 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 CNKSR2Q8WXI2 1034 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 SEC62Q99442 399 aaKnown RBP11.17□□□□□ -0.62
CHD8-206ENST00000553870 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
CHD8-206ENST00000553870 ZNF287Q9HBT7 754 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms