RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 CFHR5Q9BXR6 569 aa15.3■□□□□ 0.04
CHGA-203ENST00000553866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHGA-203ENST00000553866 SALL3Q9BXA9 1300 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 MAGEB6P1A0A0J9YX57 407 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 BTBD19C9JJ37 291 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 GPR25O00155 361 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 IGHDP01880 384 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 PTPRAP18433 802 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 MOGSQ13724 837 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 LCORLQ8N3X6 602 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 MYH7P12883 1935 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 ATAD5Q96QE3 1844 aa15.29■□□□□ 0.04
CHGA-203ENST00000553866 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
CHGA-203ENST00000553866 CAPN15O75808 1086 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 USP5P45974 858 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 CAP1Q01518 475 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 CRHR2Q13324 411 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 ANKRD45Q5TZF3 282 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 METTL16Q86W50 562 aaKnown RBP15.28■□□□□ 0.04
CHGA-203ENST00000553866 MCOLN1Q9GZU1 580 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 PI4KBQ9UBF8 816 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
CHGA-203ENST00000553866 PRKAB2O43741 272 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.04
CHGA-203ENST00000553866 ALDH1A1P00352 501 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 CETPP11597 493 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 SNAPC2Q13487 334 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 PI4K2BQ8TCG2 481 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 SDR42E1Q8WUS8 393 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 DHX36Q9H2U1 1008 aaKnown RBP15.27■□□□□ 0.04
CHGA-203ENST00000553866 ARMT1Q9H993 441 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 AFG3L2Q9Y4W6 797 aa15.27■□□□□ 0.04
CHGA-203ENST00000553866 PTPRFP10586 1907 aa15.26■□□□□ 0.03
CHGA-203ENST00000553866 DGKZQ13574 1117 aa15.26■□□□□ 0.03
CHGA-203ENST00000553866 TMED8Q6PL24 325 aaPredicted RBP15.26■□□□□ 0.03
CHGA-203ENST00000553866 HERC5Q9UII4 1024 aaKnown RBP15.26■□□□□ 0.03
CHGA-203ENST00000553866 NAV1Q8NEY1 1877 aa15.26■□□□□ 0.03
CHGA-203ENST00000553866 SMIM22K7EJ46 135 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 MBD4O95243 580 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 CAP2P40123 477 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 PLCD1P51178 756 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 NOM1Q5C9Z4 860 aaKnown RBP15.25■□□□□ 0.03
CHGA-203ENST00000553866 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 ABHD8Q96I13 439 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 PUS7LQ9H0K6 701 aaKnown RBP15.25■□□□□ 0.03
CHGA-203ENST00000553866 PICK1Q9NRD5 415 aa15.25■□□□□ 0.03
CHGA-203ENST00000553866 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 CXCL11O14625 94 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 FKTNO75072 461 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 GDF11O95390 407 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 CYP2D6P10635 497 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 UBE3CQ15386 1083 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 TAF1CQ15572 869 aaPredicted RBP15.24■□□□□ 0.03
CHGA-203ENST00000553866 CERS3Q8IU89 383 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 FOXP4Q8IVH2 680 aaPredicted RBP15.24■□□□□ 0.03
CHGA-203ENST00000553866 KBTBD3Q8NAB2 608 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
CHGA-203ENST00000553866 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHGA-203ENST00000553866 BAZ2AQ9UIF9 1905 aaKnown RBP15.23■□□□□ 0.03
CHGA-203ENST00000553866 ZSWIM8A7E2V4 1837 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 A0A0G2JLL6 359 aaPredicted RBP15.23■□□□□ 0.03
CHGA-203ENST00000553866 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 HLA-DOAP06340 250 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 MX1P20591 662 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 AAMPQ13685 434 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 B4GALNT3Q6L9W6 998 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
CHGA-203ENST00000553866 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
CHGA-203ENST00000553866 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 CRACR2BQ8N4Y2 399 aaPredicted RBP15.23■□□□□ 0.03
CHGA-203ENST00000553866 OSBP2Q969R2 916 aa15.23■□□□□ 0.03
CHGA-203ENST00000553866 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
CHGA-203ENST00000553866 DCP1AQ9NPI6 582 aaPredicted RBP15.23■□□□□ 0.03
CHGA-203ENST00000553866 HTTP42858 3142 aa15.22■□□□□ 0.03
CHGA-203ENST00000553866 PDHXO00330 501 aa15.22■□□□□ 0.03
CHGA-203ENST00000553866 ANKRD23Q86SG2 305 aa15.22■□□□□ 0.03
CHGA-203ENST00000553866 CD99L2Q8TCZ2 262 aa15.22■□□□□ 0.03
CHGA-203ENST00000553866 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
CHGA-203ENST00000553866 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
CHGA-203ENST00000553866 CYP2D7A0A087X1C5 515 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 GLRX3O76003 335 aaKnown RBP15.21■□□□□ 0.03
CHGA-203ENST00000553866 SHMT1P34896 483 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 GABPAQ06546 454 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 SPP2Q13103 211 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 TATDN1Q6P1N9 297 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 GADL1Q6ZQY3 521 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 SEC62Q99442 399 aaKnown RBP15.21■□□□□ 0.03
CHGA-203ENST00000553866 EHD4Q9H223 541 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 ZFYVE28Q9HCC9 887 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 MCM9Q9NXL9 1143 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 STAP2Q9UGK3 403 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 SERPINB13Q9UIV8 391 aa15.21■□□□□ 0.03
CHGA-203ENST00000553866 ADGRA2Q96PE1 1338 aa15.2■□□□□ 0.02
CHGA-203ENST00000553866 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
CHGA-203ENST00000553866 M0R2C6 588 aa15.2■□□□□ 0.02
CHGA-203ENST00000553866 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
CHGA-203ENST00000553866 TLR2O60603 784 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms