RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 PICK1Q9NRD5 415 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
PRKCH-207ENST00000553831 PI4KBQ9UBF8 816 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 KCNH4Q9UQ05 1017 aa17.23■□□□□ 0.35
PRKCH-207ENST00000553831 CHGBP05060 677 aa17.22■□□□□ 0.35
PRKCH-207ENST00000553831 ADD2P35612 726 aa17.22■□□□□ 0.35
PRKCH-207ENST00000553831 CRHR2Q13324 411 aa17.22■□□□□ 0.35
PRKCH-207ENST00000553831 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
PRKCH-207ENST00000553831 NOM1Q5C9Z4 860 aaKnown RBP17.22■□□□□ 0.35
PRKCH-207ENST00000553831 FAM43AQ8N2R8 423 aa17.22■□□□□ 0.35
PRKCH-207ENST00000553831 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKCH-207ENST00000553831 DNAJC18Q9H819 358 aa17.22■□□□□ 0.35
PRKCH-207ENST00000553831 HERC5Q9UII4 1024 aaKnown RBP17.22■□□□□ 0.35
PRKCH-207ENST00000553831 PTPRAP18433 802 aa17.21■□□□□ 0.35
PRKCH-207ENST00000553831 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.35
PRKCH-207ENST00000553831 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
PRKCH-207ENST00000553831 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
PRKCH-207ENST00000553831 MCOLN1Q9GZU1 580 aa17.21■□□□□ 0.35
PRKCH-207ENST00000553831 ZHX2Q9Y6X8 837 aa17.21■□□□□ 0.35
PRKCH-207ENST00000553831 DDX60LQ5H9U9 1706 aaKnown RBP17.21■□□□□ 0.35
PRKCH-207ENST00000553831 BTBD19C9JJ37 291 aa17.2■□□□□ 0.34
PRKCH-207ENST00000553831 HLA-DOAP06340 250 aa17.2■□□□□ 0.34
PRKCH-207ENST00000553831 DGKZQ13574 1117 aa17.2■□□□□ 0.34
PRKCH-207ENST00000553831 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
PRKCH-207ENST00000553831 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
PRKCH-207ENST00000553831 METTL16Q86W50 562 aaKnown RBP17.2■□□□□ 0.34
PRKCH-207ENST00000553831 CRNKL1Q9BZJ0 848 aaKnown RBP17.2■□□□□ 0.34
PRKCH-207ENST00000553831 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
PRKCH-207ENST00000553831 MYH1P12882 1939 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 MYH7P12883 1935 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 NAV1Q8NEY1 1877 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 FKTNO75072 461 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 MBD4O95243 580 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 CAP2P40123 477 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 MOGSQ13724 837 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 UBE3CQ15386 1083 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 TAF1CQ15572 869 aaPredicted RBP17.19■□□□□ 0.34
PRKCH-207ENST00000553831 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
PRKCH-207ENST00000553831 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 SALL3Q9BXA9 1300 aa17.19■□□□□ 0.34
PRKCH-207ENST00000553831 CXCL11O14625 94 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 CAPN15O75808 1086 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 MX1P20591 662 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 CTU1Q7Z7A3 348 aaKnown RBP17.18■□□□□ 0.34
PRKCH-207ENST00000553831 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
PRKCH-207ENST00000553831 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 SDR42E1Q8WUS8 393 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 ABHD8Q96I13 439 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 TRIM34Q9BYJ4 488 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
PRKCH-207ENST00000553831 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 PHIPQ8WWQ0 1821 aa17.18■□□□□ 0.34
PRKCH-207ENST00000553831 ATAD5Q96QE3 1844 aa17.17■□□□□ 0.34
PRKCH-207ENST00000553831 A0A0G2JLL6 359 aaPredicted RBP17.17■□□□□ 0.34
PRKCH-207ENST00000553831 ERC2O15083 957 aa17.17■□□□□ 0.34
PRKCH-207ENST00000553831 ZSCAN25Q6NSZ9 544 aa17.17■□□□□ 0.34
PRKCH-207ENST00000553831 PRRT2Q7Z6L0 340 aaPredicted RBP17.17■□□□□ 0.34
PRKCH-207ENST00000553831 ANKRD23Q86SG2 305 aa17.17■□□□□ 0.34
PRKCH-207ENST00000553831 ZFYVE28Q9HCC9 887 aa17.17■□□□□ 0.34
PRKCH-207ENST00000553831 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
PRKCH-207ENST00000553831 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
PRKCH-207ENST00000553831 PRKAB2O43741 272 aa17.16■□□□□ 0.34
PRKCH-207ENST00000553831 GLRX3O76003 335 aaKnown RBP17.16■□□□□ 0.34
PRKCH-207ENST00000553831 GDF11O95390 407 aa17.16■□□□□ 0.34
PRKCH-207ENST00000553831 SHROOM1Q2M3G4 852 aaPredicted RBP17.16■□□□□ 0.34
PRKCH-207ENST00000553831 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
PRKCH-207ENST00000553831 EHD4Q9H223 541 aa17.16■□□□□ 0.34
PRKCH-207ENST00000553831 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
PRKCH-207ENST00000553831 DCP1AQ9NPI6 582 aaPredicted RBP17.16■□□□□ 0.34
PRKCH-207ENST00000553831 PTPRFP10586 1907 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 IGHDP01880 384 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 PLCD1P51178 756 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 IRX6P78412 446 aaPredicted RBP17.15■□□□□ 0.34
PRKCH-207ENST00000553831 JAG1P78504 1218 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 GPAT2Q6NUI2 795 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 TTC6Q86TZ1 520 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 SERPINB13Q9UIV8 391 aa17.15■□□□□ 0.34
PRKCH-207ENST00000553831 USP17L5A8MUK1 530 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 PDHXO00330 501 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 POLR3DP05423 398 aaPredicted RBP17.14■□□□□ 0.33
PRKCH-207ENST00000553831 ASNSP08243 561 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 EVX2Q03828 476 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 ZNF280CQ8ND82 737 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 CD99L2Q8TCZ2 262 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 ZBTB21Q9ULJ3 1066 aa17.14■□□□□ 0.33
PRKCH-207ENST00000553831 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
PRKCH-207ENST00000553831 TLR2O60603 784 aa17.13■□□□□ 0.33
PRKCH-207ENST00000553831 CYP2D6P10635 497 aa17.13■□□□□ 0.33
PRKCH-207ENST00000553831 SP3Q02447 781 aa17.13■□□□□ 0.33
PRKCH-207ENST00000553831 SPP2Q13103 211 aa17.13■□□□□ 0.33
PRKCH-207ENST00000553831 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
PRKCH-207ENST00000553831 FASTKD5Q7L8L6 764 aaKnown RBP17.13■□□□□ 0.33
PRKCH-207ENST00000553831 APPBP2Q92624 585 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms