RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 PAWRQ96IZ0 340 aaKnown RBP17.62■□□□□ 0.41
NEDD1-205ENST00000553609 MEIS3Q99687 375 aa17.62■□□□□ 0.41
NEDD1-205ENST00000553609 A0A1B0GUL7 405 aa17.61■□□□□ 0.41
NEDD1-205ENST00000553609 MNX1P50219 401 aaPredicted RBP17.61■□□□□ 0.41
NEDD1-205ENST00000553609 SLF2Q8IX21 1173 aa17.61■□□□□ 0.41
NEDD1-205ENST00000553609 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
NEDD1-205ENST00000553609 COA7Q96BR5 231 aa17.61■□□□□ 0.41
NEDD1-205ENST00000553609 LRCH3Q96II8 777 aa17.61■□□□□ 0.41
NEDD1-205ENST00000553609 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.41
NEDD1-205ENST00000553609 STAP2Q9UGK3 403 aa17.61■□□□□ 0.41
NEDD1-205ENST00000553609 GJD2Q9UKL4 321 aa17.61■□□□□ 0.41
NEDD1-205ENST00000553609 SPP2Q13103 211 aa17.6■□□□□ 0.41
NEDD1-205ENST00000553609 SPTY2D1Q68D10 685 aaPredicted RBP17.6■□□□□ 0.41
NEDD1-205ENST00000553609 PI16Q6UXB8 463 aa17.6■□□□□ 0.41
NEDD1-205ENST00000553609 XAGE2Q96GT9 111 aa17.6■□□□□ 0.41
NEDD1-205ENST00000553609 GDF15Q99988 308 aa17.6■□□□□ 0.41
NEDD1-205ENST00000553609 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
NEDD1-205ENST00000553609 PNMA3Q9UL41 463 aa17.6■□□□□ 0.41
NEDD1-205ENST00000553609 HMGCRP04035 888 aa17.59■□□□□ 0.41
NEDD1-205ENST00000553609 TFCP2Q12800 502 aa17.59■□□□□ 0.41
NEDD1-205ENST00000553609 TRIM32Q13049 653 aa17.59■□□□□ 0.41
NEDD1-205ENST00000553609 ZNF280CQ8ND82 737 aa17.59■□□□□ 0.41
NEDD1-205ENST00000553609 NSUN4Q96CB9 384 aaKnown RBP17.59■□□□□ 0.41
NEDD1-205ENST00000553609 HMG20BQ9P0W2 317 aa17.59■□□□□ 0.41
NEDD1-205ENST00000553609 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
NEDD1-205ENST00000553609 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
NEDD1-205ENST00000553609 PLXNB2O15031 1838 aa17.58■□□□□ 0.41
NEDD1-205ENST00000553609 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-205ENST00000553609 GCLCP48506 637 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-205ENST00000553609 HMGCS2P54868 508 aa17.58■□□□□ 0.4
NEDD1-205ENST00000553609 MTX1Q13505 466 aa17.58■□□□□ 0.4
NEDD1-205ENST00000553609 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
NEDD1-205ENST00000553609 SH3D19Q5HYK7 790 aa17.58■□□□□ 0.4
NEDD1-205ENST00000553609 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
NEDD1-205ENST00000553609 NECAB2Q7Z6G3 386 aa17.58■□□□□ 0.4
NEDD1-205ENST00000553609 ANKLE1Q8NAG6 615 aa17.58■□□□□ 0.4
NEDD1-205ENST00000553609 ASCC2Q9H1I8 757 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-205ENST00000553609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.58■□□□□ 0.4
NEDD1-205ENST00000553609 SIPA1L1O43166 1804 aa17.58■□□□□ 0.4
NEDD1-205ENST00000553609 ATAD5Q96QE3 1844 aa17.57■□□□□ 0.4
NEDD1-205ENST00000553609 MAP4K4O95819 1239 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-205ENST00000553609 BMP8BP34820 402 aa17.57■□□□□ 0.4
NEDD1-205ENST00000553609 CAP2P40123 477 aa17.57■□□□□ 0.4
NEDD1-205ENST00000553609 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
NEDD1-205ENST00000553609 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
NEDD1-205ENST00000553609 MORF4L1Q9UBU8 362 aa17.57■□□□□ 0.4
NEDD1-205ENST00000553609 RPTORQ8N122 1335 aa17.56■□□□□ 0.4
NEDD1-205ENST00000553609 MAP3K21Q5TCX8 1036 aa17.56■□□□□ 0.4
NEDD1-205ENST00000553609 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
NEDD1-205ENST00000553609 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
NEDD1-205ENST00000553609 AKAP2Q9Y2D5 859 aa17.56■□□□□ 0.4
NEDD1-205ENST00000553609 CT47B1P0C2W7 299 aaPredicted RBP17.55■□□□□ 0.4
NEDD1-205ENST00000553609 ARID4AP29374 1257 aaPredicted RBP17.55■□□□□ 0.4
NEDD1-205ENST00000553609 JAG1P78504 1218 aa17.55■□□□□ 0.4
NEDD1-205ENST00000553609 C7orf61Q8IZ16 206 aa17.55■□□□□ 0.4
NEDD1-205ENST00000553609 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
NEDD1-205ENST00000553609 SLC17A8Q8NDX2 589 aa17.55■□□□□ 0.4
NEDD1-205ENST00000553609 TRIB2Q92519 343 aa17.55■□□□□ 0.4
NEDD1-205ENST00000553609 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
NEDD1-205ENST00000553609 USP17L5A8MUK1 530 aa17.54■□□□□ 0.4
NEDD1-205ENST00000553609 SRGAP3O43295 1099 aa17.54■□□□□ 0.4
NEDD1-205ENST00000553609 PABPC4Q13310 644 aaKnown RBP eCLIP17.54■□□□□ 0.4
NEDD1-205ENST00000553609 WDR18Q9BV38 432 aa17.54■□□□□ 0.4
NEDD1-205ENST00000553609 DNAJC18Q9H819 358 aa17.54■□□□□ 0.4
NEDD1-205ENST00000553609 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
NEDD1-205ENST00000553609 OGDHLQ9ULD0 1010 aa17.54■□□□□ 0.4
NEDD1-205ENST00000553609 ZMYND8Q9ULU4 1186 aaPredicted RBP17.54■□□□□ 0.4
NEDD1-205ENST00000553609 DLL1O00548 723 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 PEX10O60683 326 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 LDHCP07864 332 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 MCAMP43121 646 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 GSTO1P78417 241 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 SHROOM1Q2M3G4 852 aaPredicted RBP17.53■□□□□ 0.4
NEDD1-205ENST00000553609 SH3RF3Q8TEJ3 882 aaPredicted RBP17.53■□□□□ 0.4
NEDD1-205ENST00000553609 NBPF3Q9H094 633 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 TXNRD2Q9NNW7 524 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 HMX1Q9NP08 348 aaPredicted RBP17.53■□□□□ 0.4
NEDD1-205ENST00000553609 UNC80Q8N2C7 3258 aa17.53■□□□□ 0.4
NEDD1-205ENST00000553609 PFASO15067 1338 aa17.52■□□□□ 0.4
NEDD1-205ENST00000553609 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.4
NEDD1-205ENST00000553609 MTMR2Q13614 643 aa17.52■□□□□ 0.4
NEDD1-205ENST00000553609 GPR153Q6NV75 609 aa17.52■□□□□ 0.4
NEDD1-205ENST00000553609 POTEEQ6S8J3 1075 aa17.52■□□□□ 0.4
NEDD1-205ENST00000553609 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
NEDD1-205ENST00000553609 TEX11Q8IYF3 940 aa17.52■□□□□ 0.4
NEDD1-205ENST00000553609 NEUROD6Q96NK8 337 aa17.52■□□□□ 0.4
NEDD1-205ENST00000553609 LAMA2P24043 3122 aaKnown RBP17.52■□□□□ 0.4
NEDD1-205ENST00000553609 GNAI3P08754 354 aa17.51■□□□□ 0.39
NEDD1-205ENST00000553609 MAGEA10P43363 369 aaPredicted RBP17.51■□□□□ 0.39
NEDD1-205ENST00000553609 RARSP54136 660 aaKnown RBP17.51■□□□□ 0.39
NEDD1-205ENST00000553609 BACE1P56817 501 aa17.51■□□□□ 0.39
NEDD1-205ENST00000553609 USP6NLQ92738 828 aa17.51■□□□□ 0.39
NEDD1-205ENST00000553609 P2RX7Q99572 595 aaKnown RBP17.51■□□□□ 0.39
NEDD1-205ENST00000553609 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
NEDD1-205ENST00000553609 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
NEDD1-205ENST00000553609 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
NEDD1-205ENST00000553609 COL6A1P12109 1028 aa17.5■□□□□ 0.39
NEDD1-205ENST00000553609 XRCC5P13010 732 aaKnown RBP17.5■□□□□ 0.39
NEDD1-205ENST00000553609 PRKAR2AP13861 404 aaKnown RBP17.5■□□□□ 0.39
NEDD1-205ENST00000553609 SYN1P17600 705 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms