RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SLFNL1Q499Z3 407 aa28.58■■■□□ 2.17
TDP1-205ENST00000553527 FAM43AQ8N2R8 423 aa28.58■■■□□ 2.17
TDP1-205ENST00000553527 GPATCH3Q96I76 525 aa28.58■■■□□ 2.17
TDP1-205ENST00000553527 MCOLN1Q9GZU1 580 aa28.58■■■□□ 2.17
TDP1-205ENST00000553527 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.58■■■□□ 2.17
TDP1-205ENST00000553527 DOCK1Q14185 1865 aa28.57■■■□□ 2.16
TDP1-205ENST00000553527 MYH7P12883 1935 aa28.57■■■□□ 2.16
TDP1-205ENST00000553527 CFHR5Q9BXR6 569 aa28.57■■■□□ 2.16
TDP1-205ENST00000553527 TRIM34Q9BYJ4 488 aa28.57■■■□□ 2.16
TDP1-205ENST00000553527 COL2A1P02458 1487 aaPredicted RBP28.57■■■□□ 2.16
TDP1-205ENST00000553527 FKTNO75072 461 aa28.56■■■□□ 2.16
TDP1-205ENST00000553527 PTPRAP18433 802 aa28.56■■■□□ 2.16
TDP1-205ENST00000553527 TMED8Q6PL24 325 aaPredicted RBP28.56■■■□□ 2.16
TDP1-205ENST00000553527 CCDC84Q86UT8 332 aaPredicted RBP28.56■■■□□ 2.16
TDP1-205ENST00000553527 CERS3Q8IU89 383 aa28.56■■■□□ 2.16
TDP1-205ENST00000553527 CRACR2BQ8N4Y2 399 aaPredicted RBP28.56■■■□□ 2.16
TDP1-205ENST00000553527 ABHD8Q96I13 439 aa28.56■■■□□ 2.16
TDP1-205ENST00000553527 ATAD5Q96QE3 1844 aa28.56■■■□□ 2.16
TDP1-205ENST00000553527 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.56■■■□□ 2.16
TDP1-205ENST00000553527 ZBTB47Q9UFB7 747 aaPredicted RBP28.56■■■□□ 2.16
TDP1-205ENST00000553527 SIPA1L1O43166 1804 aa28.55■■■□□ 2.16
TDP1-205ENST00000553527 BTBD19C9JJ37 291 aa28.55■■■□□ 2.16
TDP1-205ENST00000553527 TAF1CQ15572 869 aaPredicted RBP28.55■■■□□ 2.16
TDP1-205ENST00000553527 ANKRD45Q5TZF3 282 aa28.55■■■□□ 2.16
TDP1-205ENST00000553527 RIOK1Q9BRS2 568 aaKnown RBP28.55■■■□□ 2.16
TDP1-205ENST00000553527 TCRBV5S4A2TA0A5A2 114 aa28.54■■■□□ 2.16
TDP1-205ENST00000553527 CHGBP05060 677 aa28.54■■■□□ 2.16
TDP1-205ENST00000553527 HLA-DOAP06340 250 aa28.54■■■□□ 2.16
TDP1-205ENST00000553527 HERC5Q9UII4 1024 aaKnown RBP28.54■■■□□ 2.16
TDP1-205ENST00000553527 ADD2P35612 726 aa28.53■■■□□ 2.16
TDP1-205ENST00000553527 RRP1BQ14684 758 aaKnown RBP28.53■■■□□ 2.16
TDP1-205ENST00000553527 CTU1Q7Z7A3 348 aaKnown RBP28.53■■■□□ 2.16
TDP1-205ENST00000553527 FOXP4Q8IVH2 680 aaPredicted RBP28.53■■■□□ 2.16
TDP1-205ENST00000553527 KCNH4Q9UQ05 1017 aa28.53■■■□□ 2.16
TDP1-205ENST00000553527 HDAC1Q13547 482 aaPredicted RBP28.52■■■□□ 2.16
TDP1-205ENST00000553527 OTUD7AQ8TE49 926 aaPredicted RBP28.52■■■□□ 2.16
TDP1-205ENST00000553527 ARMT1Q9H993 441 aa28.52■■■□□ 2.16
TDP1-205ENST00000553527 ZFYVE28Q9HCC9 887 aa28.52■■■□□ 2.16
TDP1-205ENST00000553527 PHIPQ8WWQ0 1821 aa28.52■■■□□ 2.16
TDP1-205ENST00000553527 NOM1Q5C9Z4 860 aaKnown RBP28.51■■■□□ 2.15
TDP1-205ENST00000553527 LCORLQ8N3X6 602 aa28.51■■■□□ 2.15
TDP1-205ENST00000553527 CRNKL1Q9BZJ0 848 aaKnown RBP28.51■■■□□ 2.15
TDP1-205ENST00000553527 AFG3L2Q9Y4W6 797 aa28.51■■■□□ 2.15
TDP1-205ENST00000553527 TRIM75PA6NK02 468 aa28.5■■■□□ 2.15
TDP1-205ENST00000553527 CXCL11O14625 94 aa28.5■■■□□ 2.15
TDP1-205ENST00000553527 CAP2P40123 477 aa28.5■■■□□ 2.15
TDP1-205ENST00000553527 SDR42E1Q8WUS8 393 aa28.5■■■□□ 2.15
TDP1-205ENST00000553527 CCDC85CA6NKD9 419 aa28.49■■■□□ 2.15
TDP1-205ENST00000553527 POLR3DP05423 398 aaPredicted RBP28.49■■■□□ 2.15
TDP1-205ENST00000553527 GADL1Q6ZQY3 521 aa28.49■■■□□ 2.15
TDP1-205ENST00000553527 GCC1Q96CN9 775 aa28.49■■■□□ 2.15
TDP1-205ENST00000553527 RWDD1Q9H446 243 aaPredicted RBP28.49■■■□□ 2.15
TDP1-205ENST00000553527 NAV1Q8NEY1 1877 aa28.49■■■□□ 2.15
TDP1-205ENST00000553527 PDHXO00330 501 aa28.48■■■□□ 2.15
TDP1-205ENST00000553527 MBD4O95243 580 aa28.48■■■□□ 2.15
TDP1-205ENST00000553527 ZSCAN25Q6NSZ9 544 aa28.48■■■□□ 2.15
TDP1-205ENST00000553527 DNAJC18Q9H819 358 aa28.48■■■□□ 2.15
TDP1-205ENST00000553527 PTPRFP10586 1907 aa28.47■■■□□ 2.15
TDP1-205ENST00000553527 GDF11O95390 407 aa28.47■■■□□ 2.15
TDP1-205ENST00000553527 TTC6Q86TZ1 520 aa28.47■■■□□ 2.15
TDP1-205ENST00000553527 BAZ2AQ9UIF9 1905 aaKnown RBP28.46■■■□□ 2.15
TDP1-205ENST00000553527 PRKAB2O43741 272 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 SP3Q02447 781 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 SPP2Q13103 211 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 MOGSQ13724 837 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 UBE3CQ15386 1083 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 B4GALNT3Q6L9W6 998 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 ANKRD23Q86SG2 305 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 CD99L2Q8TCZ2 262 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 MCM9Q9NXL9 1143 aa28.46■■■□□ 2.15
TDP1-205ENST00000553527 TTC41PQ6P2S7 1318 aa28.45■■■□□ 2.15
TDP1-205ENST00000553527 A0A0G2JLL6 359 aaPredicted RBP28.45■■■□□ 2.14
TDP1-205ENST00000553527 ERC2O15083 957 aa28.45■■■□□ 2.14
TDP1-205ENST00000553527 MX1P20591 662 aa28.45■■■□□ 2.14
TDP1-205ENST00000553527 PLCD1P51178 756 aa28.45■■■□□ 2.14
TDP1-205ENST00000553527 SHROOM1Q2M3G4 852 aaPredicted RBP28.45■■■□□ 2.14
TDP1-205ENST00000553527 FASTKD5Q7L8L6 764 aaKnown RBP28.45■■■□□ 2.14
TDP1-205ENST00000553527 PRRT2Q7Z6L0 340 aaPredicted RBP28.45■■■□□ 2.14
TDP1-205ENST00000553527 METTL16Q86W50 562 aaKnown RBP28.45■■■□□ 2.14
TDP1-205ENST00000553527 KBTBD3Q8NAB2 608 aa28.45■■■□□ 2.14
TDP1-205ENST00000553527 SERPINB13Q9UIV8 391 aa28.45■■■□□ 2.14
TDP1-205ENST00000553527 USP17L5A8MUK1 530 aa28.44■■■□□ 2.14
TDP1-205ENST00000553527 ECM2O94769 699 aaPredicted RBP28.44■■■□□ 2.14
TDP1-205ENST00000553527 JAG1P78504 1218 aa28.44■■■□□ 2.14
TDP1-205ENST00000553527 GPAT2Q6NUI2 795 aa28.44■■■□□ 2.14
TDP1-205ENST00000553527 PUS7LQ9H0K6 701 aaKnown RBP28.44■■■□□ 2.14
TDP1-205ENST00000553527 ZCCHC17Q9NP64 241 aaKnown RBP28.44■■■□□ 2.14
TDP1-205ENST00000553527 TRIM17Q9Y577 477 aa28.44■■■□□ 2.14
TDP1-205ENST00000553527 IGHDP01880 384 aa28.43■■■□□ 2.14
TDP1-205ENST00000553527 ZNF280CQ8ND82 737 aa28.43■■■□□ 2.14
TDP1-205ENST00000553527 PI4K2BQ8TCG2 481 aa28.43■■■□□ 2.14
TDP1-205ENST00000553527 ERO1AQ96HE7 468 aa28.43■■■□□ 2.14
TDP1-205ENST00000553527 DCP1AQ9NPI6 582 aaPredicted RBP28.43■■■□□ 2.14
TDP1-205ENST00000553527 TLR2O60603 784 aa28.42■■■□□ 2.14
TDP1-205ENST00000553527 GLRX3O76003 335 aaKnown RBP28.42■■■□□ 2.14
TDP1-205ENST00000553527 ASNSP08243 561 aa28.42■■■□□ 2.14
TDP1-205ENST00000553527 EVX2Q03828 476 aa28.42■■■□□ 2.14
TDP1-205ENST00000553527 CPA4Q9UI42 421 aa28.42■■■□□ 2.14
TDP1-205ENST00000553527 LNPKQ9C0E8 428 aa28.41■■■□□ 2.14
TDP1-205ENST00000553527 AS3MTQ9HBK9 375 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms