RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CASZ1Q86V15 1759 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 SMTNL1A8MU46 457 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 KIF28PB7ZC32 967 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 SOCS7O14512 581 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 CDC27P30260 824 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 TDO2P48775 406 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 GSDMDP57764 484 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 CHRNDQ07001 517 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 FLAD1Q8NFF5 587 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 PDGFDQ9GZP0 370 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-205ENST00000553474 SEC31BQ9NQW1 1179 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 IMPACTQ9P2X3 320 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 NARFQ9UHQ1 456 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 PYCARDQ9ULZ3 195 aa14.93□□□□□ -0.02
SHMT2-205ENST00000553474 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
SHMT2-205ENST00000553474 SEMA3EO15041 775 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 MYO1BO43795 1136 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 SAFBQ15424 915 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHMT2-205ENST00000553474 GLIPR1L2Q4G1C9 344 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 BICDL1Q6ZP65 573 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 MPNDQ8N594 471 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 ARMT1Q9H993 441 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 FAM217BQ9NTX9 383 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-205ENST00000553474 LRP2BPQ9P2M1 347 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 HPSEQ9Y251 543 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 SLC4A4Q9Y6R1 1079 aa14.92□□□□□ -0.02
SHMT2-205ENST00000553474 MORC2Q9Y6X9 1032 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-205ENST00000553474 IKBKBO14920 756 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 CUTAO60888 179 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 PPFIA3O75145 1194 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 PFKFB1P16118 471 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 NT5C2P49902 561 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 NLRP12P59046 1061 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 WTAPQ15007 396 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 ANKRD18AQ8IVF6 992 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 FOXP1Q9H334 677 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-205ENST00000553474 BSDC1Q9NW68 430 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-205ENST00000553474 MYH6P13533 1939 aa14.91□□□□□ -0.02
SHMT2-205ENST00000553474 DEXIO95424 95 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 BCAMP50895 628 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 PTPAQ15257 358 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 LRRC8AQ8IWT6 810 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 MAP3K14Q99558 947 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.9□□□□□ -0.025e-8■■■□□ 18.8
SHMT2-205ENST00000553474 KCND1Q9NSA2 647 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 HOOK1Q9UJC3 728 aaKnown RBP14.9□□□□□ -0.02
SHMT2-205ENST00000553474 TUBE1Q9UJT0 475 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 RANBP6O60518 1105 aaKnown RBP14.9□□□□□ -0.02
SHMT2-205ENST00000553474 SYKP43405 635 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 RTN1Q16799 776 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 COL24A1Q17RW2 1714 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 CAVIN4Q5BKX8 364 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 RILPL1Q5EBL4 403 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 RESP18Q5W5W9 173 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 NOSTRINQ8IVI9 506 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 ESR2Q92731 530 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 DENND2AQ9ULE3 1009 aa14.9□□□□□ -0.02
SHMT2-205ENST00000553474 CACNA1SQ13698 1873 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 FAM177BA6PVY3 158 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 MMP1P03956 469 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 GYS1P13807 737 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 CTDSPL2Q05D32 466 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 PPARAQ07869 468 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 SLC10A5Q5PT55 438 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 LCORLQ8N3X6 602 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 AOPEPQ8N6M6 819 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 PHKBQ93100 1093 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 BRIP1Q9BX63 1249 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 OSBPL5Q9H0X9 879 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-205ENST00000553474 BCL2L12Q9HB09 334 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 MYH13Q9UKX3 1938 aa14.89□□□□□ -0.03
SHMT2-205ENST00000553474 WDHD1O75717 1129 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-205ENST00000553474 TBC1D9BQ66K14 1250 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 RAB11FIP4Q86YS3 637 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 UBAC1Q9BSL1 405 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 SLC26A6Q9BXS9 759 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 NYXQ9GZU5 481 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 CEP131Q9UPN4 1083 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 PAXBP1Q9Y5B6 917 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 MAGEB6P1A0A0J9YX57 407 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 XBP1P17861 261 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 CYP7A1P22680 504 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 KRI1Q8N9T8 703 aaKnown RBP14.88□□□□□ -0.03
SHMT2-205ENST00000553474 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
SHMT2-205ENST00000553474 CACTINQ8WUQ7 758 aaKnown RBP14.88□□□□□ -0.03
SHMT2-205ENST00000553474 RNF26Q9BY78 433 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-205ENST00000553474 SENP2Q9HC62 589 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 GJB4Q9NTQ9 266 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 NRBP1Q9UHY1 535 aa14.88□□□□□ -0.03
SHMT2-205ENST00000553474 NRDCO43847 1150 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 ZBTB7AO95365 584 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 FGRP09769 529 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 CALM1P0DP23 149 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 CALM2P0DP24 149 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 CALM3P0DP25 149 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 KCNJ6P48051 423 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 DPCR1Q3MIW9 517 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 C17orf53Q8N3J3 647 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms