RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 KLRG1Q96E93 195 aa17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 GBA2Q9HCG7 927 aaPredicted RBP17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 ARPP21Q9UBL0 812 aaPredicted RBP17.75■□□□□ 0.43
MTHFD1-204ENST00000553405 SHMT1P34896 483 aa17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 APLP1P51693 650 aa17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 C1QTNF8P60827 252 aa17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 FKBP1BP68106 108 aa17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 MAP4K1Q92918 833 aa17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
MTHFD1-204ENST00000553405 TDO2P48775 406 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 JAG1P78504 1218 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 TATDN1Q6P1N9 297 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 TTC6Q86TZ1 520 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 SAPCD2Q86UD0 394 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 SLC44A5Q8NCS7 719 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 DYNLL2Q96FJ2 89 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 NAPBQ9H115 298 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 ZNF408Q9H9D4 720 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 SERPINB13Q9UIV8 391 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 ANAPC4Q9UJX5 808 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
MTHFD1-204ENST00000553405 TMEM88BA6NKF7 163 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 APPP05067 770 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 POLR3DP05423 398 aaPredicted RBP17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 FGRP09769 529 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 PPARAQ07869 468 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 DCAF15Q66K64 600 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 HOOK2Q96ED9 719 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 TLL2Q9Y6L7 1015 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 CEP350Q5VT06 3117 aa17.72■□□□□ 0.43
MTHFD1-204ENST00000553405 GREB1LQ9C091 1923 aaPredicted RBP17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 NF2P35240 595 aa17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 PRKG1Q13976 671 aa17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 SHROOM1Q2M3G4 852 aaPredicted RBP17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 ANGEL1Q9UNK9 670 aaKnown RBP17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 TAF6LQ9Y6J9 622 aa17.71■□□□□ 0.43
MTHFD1-204ENST00000553405 DOCK1Q14185 1865 aa17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 PPP1R12BO60237 982 aaPredicted RBP17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 INPP5BP32019 993 aa17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 NOL9Q5SY16 702 aaKnown RBP17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 TBC1D10CQ8IV04 446 aa17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 NKX2-3Q8TAU0 364 aa17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 CLMNQ96JQ2 1002 aa17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 SNCAIPQ9Y6H5 919 aa17.7■□□□□ 0.42
MTHFD1-204ENST00000553405 UNCXA6NJT0 531 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 MINDY4BA8MYZ0 360 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 CDK8P49336 464 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 MAP3K9P80192 1104 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 VGLL4Q14135 290 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 CASC1Q6TDU7 716 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 C2orf69Q8N8R5 385 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 ZKSCAN4Q969J2 545 aaPredicted RBP17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 WRNIP1Q96S55 665 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 RBM8AQ9Y5S9 174 aaKnown RBP17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 PHIPQ8WWQ0 1821 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 ATAD5Q96QE3 1844 aa17.69■□□□□ 0.42
MTHFD1-204ENST00000553405 CYP21A2P08686 494 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 HSPA6P17066 643 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 RASA1P20936 1047 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 IREB2P48200 963 aaKnown RBP17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 NECTIN1Q15223 517 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 ARMC9Q7Z3E5 817 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 HHIPL1Q96JK4 782 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 ANO2Q9NQ90 1003 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 SWAP70Q9UH65 585 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 MYH8P13535 1937 aa17.68■□□□□ 0.42
MTHFD1-204ENST00000553405 RASSF10A6NK89 507 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 CTNND1O60716 968 aaKnown RBP17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 SEC24BO95487 1268 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 GUCY1A2P33402 732 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 CAP2P40123 477 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 HUNKP57058 714 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 HAND2P61296 217 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 HTRA3P83110 453 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 KCNB2Q92953 911 aa17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
MTHFD1-204ENST00000553405 ORC4O43929 436 aa17.66■□□□□ 0.42
MTHFD1-204ENST00000553405 GJA5P36382 358 aa17.66■□□□□ 0.42
MTHFD1-204ENST00000553405 AMOTL1Q8IY63 956 aa17.66■□□□□ 0.42
MTHFD1-204ENST00000553405 ANKRD13AQ8IZ07 590 aa17.66■□□□□ 0.42
MTHFD1-204ENST00000553405 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
MTHFD1-204ENST00000553405 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.66■□□□□ 0.42
MTHFD1-204ENST00000553405 CTNNA3Q9UI47 895 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms