RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 APOBEC3FQ8IUX4 373 aaKnown RBP11.62□□□□□ -0.55
TMEM260-204ENST00000553335 ZC3H15Q8WU90 426 aaKnown RBP11.62□□□□□ -0.55
TMEM260-204ENST00000553335 SDR42E1Q8WUS8 393 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 NAPBQ9H115 298 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 IL25Q9H293 177 aa11.62□□□□□ -0.55
TMEM260-204ENST00000553335 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
TMEM260-204ENST00000553335 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 DDX60LQ5H9U9 1706 aaKnown RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 GSG1L2A8MUP6 293 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 ENTPD3O75355 529 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 HIRAP54198 1017 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 ALX1Q15699 326 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 PPP1R15BQ5SWA1 713 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 VPS53Q5VIR6 699 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 ANGEL2Q5VTE6 544 aaKnown RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 FAM83AQ86UY5 434 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 MAPKAPK5Q8IW41 473 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 MAP4K1Q92918 833 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 DCPSQ96C86 337 aaKnown RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 BACH2Q9BYV9 841 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 LSG1Q9H089 658 aaKnown RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 UPF2Q9HAU5 1272 aaKnown RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-204ENST00000553335 CTNNA3Q9UI47 895 aa11.61□□□□□ -0.55
TMEM260-204ENST00000553335 ZMYM6O95789 1325 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 FLT1P17948 1338 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 TCP10L2B9ZVM9 353 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 MCCP23508 829 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 CACNB3P54284 484 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 PTH1RQ03431 593 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 EVX2Q03828 476 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 FAM151AQ8WW52 585 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-204ENST00000553335 MCM9Q9NXL9 1143 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 GGA3Q9NZ52 723 aa11.6□□□□□ -0.55
TMEM260-204ENST00000553335 ARPP21Q9UBL0 812 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-204ENST00000553335 COL2A1P02458 1487 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-204ENST00000553335 FGAP02671 866 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-204ENST00000553335 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 TCP10Q12799 353 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 NFIAQ12857 509 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
TMEM260-204ENST00000553335 SBK1Q52WX2 424 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 RNF20Q5VTR2 975 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 TTC6Q86TZ1 520 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 DHX36Q9H2U1 1008 aaKnown RBP11.59□□□□□ -0.55
TMEM260-204ENST00000553335 EPB41L4AQ9HCS5 686 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-204ENST00000553335 DDX4Q9NQI0 724 aaKnown RBP11.59□□□□□ -0.55
TMEM260-204ENST00000553335 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 PPP2R3BQ9Y5P8 575 aa11.59□□□□□ -0.55
TMEM260-204ENST00000553335 RBM8AQ9Y5S9 174 aaKnown RBP11.59□□□□□ -0.55
TMEM260-204ENST00000553335 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 USP17L12C9JPN9 530 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 USP17L21D6R901 530 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 ZNF213O14771 459 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 KIF3CO14782 793 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 SEC24BO95487 1268 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 SLC3A2P08195 630 aaKnown RBP11.58□□□□□ -0.56
TMEM260-204ENST00000553335 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
TMEM260-204ENST00000553335 SULF1Q8IWU6 871 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 ZSCAN29Q8IWY8 852 aaPredicted RBP11.58□□□□□ -0.56
TMEM260-204ENST00000553335 USP26Q9BXU7 913 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 NMRK2Q9NPI5 230 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
TMEM260-204ENST00000553335 PGAP2Q9UHJ9 254 aa11.58□□□□□ -0.56
TMEM260-204ENST00000553335 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
TMEM260-204ENST00000553335 CNTNAP1P78357 1384 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 FOXP2O15409 715 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 RASA3Q14644 834 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 CDC37L1Q7L3B6 337 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 PDCD7Q8N8D1 485 aaKnown RBP11.57□□□□□ -0.56
TMEM260-204ENST00000553335 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 TRIM34Q9BYJ4 488 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 SAP30BPQ9UHR5 308 aaKnown RBP11.57□□□□□ -0.56
TMEM260-204ENST00000553335 PALD1Q9ULE6 856 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 SIPA1L1O43166 1804 aa11.57□□□□□ -0.56
TMEM260-204ENST00000553335 ATRNL1Q5VV63 1379 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 TOMM70O94826 608 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 ZKSCAN1P17029 563 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-204ENST00000553335 HSPA6P17066 643 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 HSPA4P34932 840 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 PPARAQ07869 468 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 NECTIN1Q15223 517 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 C12orf60Q5U649 245 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 FOXP4Q8IVH2 680 aaPredicted RBP11.56□□□□□ -0.56
TMEM260-204ENST00000553335 TMEM39BQ9GZU3 492 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 PI4KBQ9UBF8 816 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 ANAPC4Q9UJX5 808 aa11.56□□□□□ -0.56
TMEM260-204ENST00000553335 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-204ENST00000553335 SLC27A2O14975 620 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 ATMINO43313 823 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-204ENST00000553335 PDE4BQ07343 736 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 SLC4A8Q2Y0W8 1093 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 SUPT20HL1Q3ZLR7 823 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms