RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 DDTLA6NHG4 134 aaPredicted RBP14.9□□□□□ -0.02
SNRPF-205ENST00000553192 RGS3P49796 1198 aa14.9□□□□□ -0.02
SNRPF-205ENST00000553192 SPP2Q13103 211 aa14.9□□□□□ -0.02
SNRPF-205ENST00000553192 PDE3AQ14432 1141 aa14.9□□□□□ -0.02
SNRPF-205ENST00000553192 TRMT44Q8IYL2 757 aaKnown RBP14.9□□□□□ -0.02
SNRPF-205ENST00000553192 VGLL2Q8N8G2 317 aa14.9□□□□□ -0.02
SNRPF-205ENST00000553192 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
SNRPF-205ENST00000553192 AK9Q5TCS8 1911 aa14.9□□□□□ -0.02
SNRPF-205ENST00000553192 MROH5Q6ZUA9 1318 aa14.9□□□□□ -0.02
SNRPF-205ENST00000553192 RFX7Q2KHR2 1363 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 ITGB8P26012 769 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 MRPS5P82675 430 aaKnown RBP14.89□□□□□ -0.03
SNRPF-205ENST00000553192 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
SNRPF-205ENST00000553192 MORN1Q5T089 497 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 BEND3Q5T5X7 828 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 SNX27Q96L92 541 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 LRFN3Q9BTN0 628 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 IDI2Q9BXS1 227 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 PRDM5Q9NQX1 630 aaPredicted RBP14.89□□□□□ -0.03
SNRPF-205ENST00000553192 PDLIM7Q9NR12 457 aa14.89□□□□□ -0.03
SNRPF-205ENST00000553192 DNM1LO00429 736 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 ENTPD3O75355 529 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 DNAJB2P25686 324 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 PRDX5P30044 214 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 HMGCS2P54868 508 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 Q3C1V9 767 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 LRRC24Q50LG9 513 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 SLC39A5Q6ZMH5 540 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 LPAR1Q92633 364 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 TSR2Q969E8 191 aaKnown RBP14.88□□□□□ -0.03
SNRPF-205ENST00000553192 KAZALD1Q96I82 304 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 RNPC3Q96LT9 517 aaKnown RBP14.88□□□□□ -0.03
SNRPF-205ENST00000553192 ZNF576Q9H609 170 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 FLRT1Q9NZU1 646 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 DDX20Q9UHI6 824 aaKnown RBP14.88□□□□□ -0.03
SNRPF-205ENST00000553192 DOCK1Q14185 1865 aa14.88□□□□□ -0.03
SNRPF-205ENST00000553192 CALD1Q05682 793 aaKnown RBP14.87□□□□□ -0.03
SNRPF-205ENST00000553192 SNX17Q15036 470 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 TRIM60Q495X7 471 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 SH3D19Q5HYK7 790 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 AKNAD1Q5T1N1 836 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 P2RX7Q99572 595 aaKnown RBP14.87□□□□□ -0.03
SNRPF-205ENST00000553192 PORCNQ9H237 461 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 DDX4Q9NQI0 724 aaKnown RBP14.87□□□□□ -0.03
SNRPF-205ENST00000553192 HCN4Q9Y3Q4 1203 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 LOC285556D6RIA3 1793 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 FRMPD3Q5JV73 1810 aa14.87□□□□□ -0.03
SNRPF-205ENST00000553192 F6X3S4 739 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 APAF1O14727 1248 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 PDE8BO95263 885 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 RGS2P41220 211 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 PABPC4Q13310 644 aaKnown RBP eCLIP14.86□□□□□ -0.031e-11■□□□□ 8.4
SNRPF-205ENST00000553192 ADGRE1Q14246 886 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 GPR142Q7Z601 462 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 ALYREFQ86V81 257 aaKnown RBP14.86□□□□□ -0.03
SNRPF-205ENST00000553192 ZSCAN29Q8IWY8 852 aaPredicted RBP14.86□□□□□ -0.03
SNRPF-205ENST00000553192 ZNF280CQ8ND82 737 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 GPRC5AQ8NFJ5 357 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 WDR66Q8TBY9 1149 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 APBA2Q99767 749 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 EPHX3Q9H6B9 360 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 RBPJLQ9UBG7 517 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 DOCK2Q92608 1830 aa14.86□□□□□ -0.03
SNRPF-205ENST00000553192 FAM196BA6NMK8 535 aa14.85□□□□□ -0.03
SNRPF-205ENST00000553192 GRM8O00222 908 aa14.85□□□□□ -0.03
SNRPF-205ENST00000553192 BMP1P13497 986 aa14.85□□□□□ -0.03
SNRPF-205ENST00000553192 FGFR2P21802 821 aa14.85□□□□□ -0.03
SNRPF-205ENST00000553192 RRP1BQ14684 758 aaKnown RBP14.85□□□□□ -0.03
SNRPF-205ENST00000553192 TWISTNBQ3B726 338 aaPredicted RBP14.85□□□□□ -0.03
SNRPF-205ENST00000553192 GJC2Q5T442 439 aaPredicted RBP14.85□□□□□ -0.03
SNRPF-205ENST00000553192 TRPV1Q8NER1 839 aa14.85□□□□□ -0.03
SNRPF-205ENST00000553192 TIFAQ96CG3 184 aa14.85□□□□□ -0.03
SNRPF-205ENST00000553192 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.84□□□□□ -0.03
SNRPF-205ENST00000553192 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.84□□□□□ -0.03
SNRPF-205ENST00000553192 MAPK4P31152 587 aa14.84□□□□□ -0.03
SNRPF-205ENST00000553192 WDR43Q15061 677 aaKnown RBP eCLIP14.84□□□□□ -0.03
SNRPF-205ENST00000553192 METTL24Q5JXM2 366 aa14.84□□□□□ -0.03
SNRPF-205ENST00000553192 SUCLG2Q96I99 432 aa14.84□□□□□ -0.03
SNRPF-205ENST00000553192 PRDM12Q9H4Q4 367 aa14.84□□□□□ -0.03
SNRPF-205ENST00000553192 KIF16BQ96L93 1317 aa14.84□□□□□ -0.03
SNRPF-205ENST00000553192 RLFQ13129 1914 aa14.84□□□□□ -0.03
SNRPF-205ENST00000553192 MUC6Q6W4X9 2439 aa14.83□□□□□ -0.04
SNRPF-205ENST00000553192 TBC1D12O60347 775 aa14.83□□□□□ -0.04
SNRPF-205ENST00000553192 HOXA7P31268 230 aaPredicted RBP14.83□□□□□ -0.04
SNRPF-205ENST00000553192 HERVK_113P62684 666 aa14.83□□□□□ -0.04
SNRPF-205ENST00000553192 MAP2K5Q13163 448 aa14.83□□□□□ -0.04
SNRPF-205ENST00000553192 RALBP1Q15311 655 aa14.83□□□□□ -0.04
SNRPF-205ENST00000553192 CCDC85BQ15834 202 aaPredicted RBP14.83□□□□□ -0.04
SNRPF-205ENST00000553192 PLEKHH3Q7Z736 793 aa14.83□□□□□ -0.04
SNRPF-205ENST00000553192 MSCO60682 206 aa14.82□□□□□ -0.04
SNRPF-205ENST00000553192 IGHA2P01877 340 aa14.82□□□□□ -0.04
SNRPF-205ENST00000553192 ERVK-9P63128 1117 aa14.82□□□□□ -0.04
SNRPF-205ENST00000553192 ERVK-24P63145 666 aa14.82□□□□□ -0.04
SNRPF-205ENST00000553192 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
SNRPF-205ENST00000553192 EDC3Q96F86 508 aaKnown RBP14.82□□□□□ -0.04
SNRPF-205ENST00000553192 GAS2L1Q99501 681 aaPredicted RBP14.82□□□□□ -0.04
SNRPF-205ENST00000553192 UTYO14607 1347 aa14.82□□□□□ -0.04
SNRPF-205ENST00000553192 GAKO14976 1311 aa14.82□□□□□ -0.04
SNRPF-205ENST00000553192 LDHBP07195 334 aaKnown RBP14.81□□□□□ -0.04
SNRPF-205ENST00000553192 CNGA1P29973 690 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms