RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 CACNA1SQ13698 1873 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 CTDNEP1O95476 244 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 NTSR2O95665 410 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 PHKA1P46020 1223 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 KCNQ4P56696 695 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 ETF1P62495 437 aaKnown RBP8.44□□□□□ -1.06
BEST3-212ENST00000553096 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
BEST3-212ENST00000553096 CCDC158Q5M9N0 1113 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 SYT10Q6XYQ8 523 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 SMIM5Q71RC9 77 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 HOMER1Q86YM7 354 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 LINC00116Q8NCU8 138 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 MNS1Q8NEH6 495 aa8.44□□□□□ -1.06
BEST3-212ENST00000553096 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
BEST3-212ENST00000553096 GOLGA6L9A6NEM1 432 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 ZSCAN12O43309 604 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 TRIM37O94972 964 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 PDE8BO95263 885 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 ERCC6LQ2NKX8 1250 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 ARHGAP29Q52LW3 1261 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 BRAPQ7Z569 592 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 DEFB132Q7Z7B7 95 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 FBXL16Q8N461 479 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 XPO4Q9C0E2 1151 aaKnown RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 CNNM1Q9NRU3 951 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 ZNF446Q9NWS9 450 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 IFNKQ9P0W0 207 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 BAZ2AQ9UIF9 1905 aaKnown RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 EFCAB8A8MWE9 144 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 DHX16O60231 1041 aaKnown RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 SLC3A2P08195 630 aaKnown RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 CCDC172P0C7W6 258 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 PNMA6AP0CW24 399 aaPredicted RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 POLD1P28340 1107 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 CLCN6P51797 869 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 STK38Q15208 465 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 CHST3Q7LGC8 479 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 TXLNBQ8N3L3 684 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 GPHNQ9NQX3 736 aaPredicted RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 POLR3EQ9NVU0 708 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 DNAI1Q9UI46 699 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 PCDHA7Q9UN72 937 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 FHOD1Q9Y613 1164 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 APOBRQ0VD83 1088 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 GPS2Q13227 327 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 ARMCX5Q6P1M9 558 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 C3orf67Q6ZVT6 689 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 NBPF5PQ86XG9 351 aaPredicted RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 ZNF512BQ96KM6 892 aaPredicted RBP8.43□□□□□ -1.06
BEST3-212ENST00000553096 DENND2AQ9ULE3 1009 aa8.43□□□□□ -1.06
BEST3-212ENST00000553096 CARMIL3Q8ND23 1372 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 TCRBV5S4A2TA0A5A2 114 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 ADD2P35612 726 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 LRRFIP1Q32MZ4 808 aaKnown RBP8.42□□□□□ -1.06
BEST3-212ENST00000553096 GORABQ5T7V8 394 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 TSHZ1Q6ZSZ6 1077 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 LINC00301Q8NCQ3 95 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 APPBP2Q92624 585 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 ORC3Q9UBD5 711 aaPredicted RBP8.42□□□□□ -1.06
BEST3-212ENST00000553096 COL1A1P02452 1464 aaPredicted RBP8.42□□□□□ -1.06
BEST3-212ENST00000553096 ZRANB2O95218 330 aaKnown RBP eCLIP8.42□□□□□ -1.06
BEST3-212ENST00000553096 FGAP02671 866 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 ANTXR2P58335 489 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 HAND2P61296 217 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 PIK3R5Q8WYR1 880 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 MYCBPQ99417 103 aaPredicted RBP8.42□□□□□ -1.06
BEST3-212ENST00000553096 MPHOSPH8Q99549 860 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 WWC3Q9ULE0 1092 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 LAMB1P07942 1786 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 RTL9Q8NET4 1388 aa8.42□□□□□ -1.06
BEST3-212ENST00000553096 DLEC1Q9Y238 1755 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 TULP2O00295 520 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 SPTLC2O15270 562 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 GPAA1O43292 621 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 EVCP57679 992 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 DPCR1Q3MIW9 517 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 AK7Q96M32 723 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 UTP14AQ9BVJ6 771 aaKnown RBP8.41□□□□□ -1.06
BEST3-212ENST00000553096 FTOQ9C0B1 505 aaKnown RBP eCLIP8.41□□□□□ -1.06
BEST3-212ENST00000553096 NCOA5Q9HCD5 579 aaKnown RBP8.41□□□□□ -1.06
BEST3-212ENST00000553096 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.41□□□□□ -1.06
BEST3-212ENST00000553096 KIAA1551Q9HCM1 1747 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 UBR3Q6ZT12 1888 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 MYH6P13533 1939 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 MAST2Q6P0Q8 1798 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 MROH5Q6ZUA9 1318 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 ERICH4A6NGS2 130 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 WTIPA6NIX2 430 aaPredicted RBP8.41□□□□□ -1.06
BEST3-212ENST00000553096 PDIA3P30101 505 aaKnown RBP8.41□□□□□ -1.06
BEST3-212ENST00000553096 NDUFA8P51970 172 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 FANCCQ00597 558 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 PUM3Q15397 648 aaKnown RBP8.41□□□□□ -1.06
BEST3-212ENST00000553096 WASHC4Q2M389 1173 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 JAKMIP3Q5VZ66 844 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 SYNE3Q6ZMZ3 975 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 AMIGO3Q86WK7 504 aa8.41□□□□□ -1.06
BEST3-212ENST00000553096 MB21D2Q8IYB1 491 aaPredicted RBP8.41□□□□□ -1.06
BEST3-212ENST00000553096 NIP7Q9Y221 180 aaKnown RBP eCLIP8.41□□□□□ -1.06
BEST3-212ENST00000553096 MYH2Q9UKX2 1941 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms