RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 GSTO1P78417 241 aa12□□□□□ -0.49
MMP19-209ENST00000552872 NECTIN1Q15223 517 aa12□□□□□ -0.49
MMP19-209ENST00000552872 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
MMP19-209ENST00000552872 TRPM4Q8TD43 1214 aa12□□□□□ -0.49
MMP19-209ENST00000552872 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
MMP19-209ENST00000552872 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
MMP19-209ENST00000552872 NAPBQ9H115 298 aa12□□□□□ -0.49
MMP19-209ENST00000552872 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
MMP19-209ENST00000552872 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
MMP19-209ENST00000552872 POLR2AP24928 1970 aaKnown RBP12□□□□□ -0.49
MMP19-209ENST00000552872 PATL2C9JE40 543 aaKnown RBP12□□□□□ -0.49
MMP19-209ENST00000552872 USP17L12C9JPN9 530 aa12□□□□□ -0.49
MMP19-209ENST00000552872 USP17L21D6R901 530 aa12□□□□□ -0.49
MMP19-209ENST00000552872 HSPA4P34932 840 aa12□□□□□ -0.49
MMP19-209ENST00000552872 TNIP1Q15025 636 aa12□□□□□ -0.49
MMP19-209ENST00000552872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.49
MMP19-209ENST00000552872 TBC1D10CQ8IV04 446 aa12□□□□□ -0.49
MMP19-209ENST00000552872 SLC44A5Q8NCS7 719 aa12□□□□□ -0.49
MMP19-209ENST00000552872 DYNLL2Q96FJ2 89 aa12□□□□□ -0.49
MMP19-209ENST00000552872 DCP1AQ9NPI6 582 aaPredicted RBP12□□□□□ -0.49
MMP19-209ENST00000552872 GAKO14976 1311 aa12□□□□□ -0.49
MMP19-209ENST00000552872 VGLL3A8MV65 326 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
MMP19-209ENST00000552872 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
MMP19-209ENST00000552872 PLCD1P51178 756 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 DLGAP5Q15398 846 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 RRP12Q5JTH9 1297 aaKnown RBP11.99□□□□□ -0.49
MMP19-209ENST00000552872 MYOZ2Q9NPC6 264 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 WNT10BO00744 389 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 BAG3O95817 575 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 LDHCP07864 332 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 ZSCAN23Q3MJ62 389 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 JAKMIP1Q96N16 626 aaKnown RBP11.99□□□□□ -0.49
MMP19-209ENST00000552872 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
MMP19-209ENST00000552872 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 TOMM22Q9NS69 142 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 FZD1Q9UP38 647 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 CENPFP49454 3210 aa11.99□□□□□ -0.49
MMP19-209ENST00000552872 FLT1P17948 1338 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 LAMA4Q16363 1823 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 MYH1P12882 1939 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 CASTP20810 708 aaKnown RBP11.98□□□□□ -0.49
MMP19-209ENST00000552872 CBX1P83916 185 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 CTR9Q6PD62 1173 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 ZDHHC15Q96MV8 337 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 DSCC1Q9BVC3 393 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 SHROOM1Q2M3G4 852 aaPredicted RBP11.98□□□□□ -0.49
MMP19-209ENST00000552872 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
MMP19-209ENST00000552872 CNPY4Q8N129 248 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 RBSNQ9H1K0 784 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 GPHNQ9NQX3 736 aaPredicted RBP11.98□□□□□ -0.49
MMP19-209ENST00000552872 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
MMP19-209ENST00000552872 NEDD4P46934 1319 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 NAV1Q8NEY1 1877 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 ZNF213O14771 459 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 GRIN3BO60391 1043 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 HIRAP54198 1017 aaPredicted RBP11.97□□□□□ -0.49
MMP19-209ENST00000552872 HHIPL2Q6UWX4 724 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
MMP19-209ENST00000552872 GPC2Q8N158 579 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 AGBL3Q8NEM8 1001 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 ZKSCAN3Q9BRR0 538 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 FAM198AQ9UFP1 575 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 U3KPZ7 1027 aaPredicted RBP11.97□□□□□ -0.49
MMP19-209ENST00000552872 MYRIPQ8NFW9 859 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
MMP19-209ENST00000552872 TMEM39BQ9GZU3 492 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 GPRC5DQ9NZD1 345 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 CCDC39Q9UFE4 941 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
MMP19-209ENST00000552872 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
MMP19-209ENST00000552872 E7EWF7 191 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 MCCP23508 829 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 NEK4P51957 841 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 PPP4CP60510 307 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 RAB11FIP4Q86YS3 637 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 ZNF70Q9UC06 446 aaPredicted RBP11.96□□□□□ -0.49
MMP19-209ENST00000552872 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
MMP19-209ENST00000552872 B4E1Z4 1266 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 CLGNO14967 610 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 POLR3DP05423 398 aaPredicted RBP11.96□□□□□ -0.5
MMP19-209ENST00000552872 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.5
MMP19-209ENST00000552872 PPARAQ07869 468 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 SLC20A2Q08357 652 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.5
MMP19-209ENST00000552872 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 SH3BP5LQ7L8J4 393 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 NACAP1Q9BZK3 213 aa11.96□□□□□ -0.5
MMP19-209ENST00000552872 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.5
MMP19-209ENST00000552872 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
MMP19-209ENST00000552872 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
MMP19-209ENST00000552872 FAM47AQ5JRC9 791 aa11.95□□□□□ -0.5
MMP19-209ENST00000552872 KCNG1Q9UIX4 513 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms