RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 ATAD5Q96QE3 1844 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 LDHCP07864 332 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 SPP2Q13103 211 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 POLA2Q14181 598 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 TNNI3KQ59H18 835 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 TTC39AQ5SRH9 613 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 ADGRA1Q86SQ6 560 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 AATFQ9NY61 560 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00661-207ENST00000552685 FPGT-TNNI3KV9GXZ4 949 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 DOCK3Q8IZD9 2030 aa12.19□□□□□ -0.46
LINC00661-207ENST00000552685 TBC1D12O60347 775 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
LINC00661-207ENST00000552685 UQCRFS1P1P0C7P4 283 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 RLBP1P12271 317 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 ELNP15502 786 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
LINC00661-207ENST00000552685 MAPKAPK5Q8IW41 473 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 ANKRD13CQ8N6S4 541 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 SMCR8Q8TEV9 937 aaPredicted RBP12.18□□□□□ -0.46
LINC00661-207ENST00000552685 RNF208Q9H0X6 261 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 UNC93B1Q9H1C4 597 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 TLR7Q9NYK1 1049 aaKnown RBP12.18□□□□□ -0.46
LINC00661-207ENST00000552685 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 SIPA1L1O43166 1804 aa12.18□□□□□ -0.46
LINC00661-207ENST00000552685 ADCY3O60266 1144 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
LINC00661-207ENST00000552685 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-207ENST00000552685 ZAP70P43403 619 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 FLT3LGP49771 235 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 HMGCS2P54868 508 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 JAG1P78504 1218 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 ATP8B2P98198 1209 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00661-207ENST00000552685 NAA16Q6N069 864 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-207ENST00000552685 MIER1Q8N108 512 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 SSH3Q8TE77 659 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 TGFBRAP1Q8WUH2 860 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 CCDC8Q9H0W5 538 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-207ENST00000552685 PIH1D3Q9NQM4 214 aaKnown RBP12.17□□□□□ -0.46
LINC00661-207ENST00000552685 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
LINC00661-207ENST00000552685 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
LINC00661-207ENST00000552685 MAST2Q6P0Q8 1798 aa12.16□□□□□ -0.46
LINC00661-207ENST00000552685 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
LINC00661-207ENST00000552685 PEX10O60683 326 aa12.16□□□□□ -0.46
LINC00661-207ENST00000552685 CAP2P40123 477 aa12.16□□□□□ -0.46
LINC00661-207ENST00000552685 DYNLL1P63167 89 aaKnown RBP12.16□□□□□ -0.46
LINC00661-207ENST00000552685 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
LINC00661-207ENST00000552685 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
LINC00661-207ENST00000552685 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
LINC00661-207ENST00000552685 NOL10Q9BSC4 688 aaKnown RBP12.16□□□□□ -0.46
LINC00661-207ENST00000552685 SAP30BPQ9UHR5 308 aaKnown RBP12.16□□□□□ -0.46
LINC00661-207ENST00000552685 DBNLQ9UJU6 430 aaKnown RBP12.16□□□□□ -0.46
LINC00661-207ENST00000552685 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
LINC00661-207ENST00000552685 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 LOC285556D6RIA3 1793 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 COL2A1P02458 1487 aaPredicted RBP12.15□□□□□ -0.46
LINC00661-207ENST00000552685 GDF11O95390 407 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 MAP4K4O95819 1239 aaPredicted RBP12.15□□□□□ -0.46
LINC00661-207ENST00000552685 INHAP05111 366 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 GJB1P08034 283 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 GJA8P48165 433 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 UBXN2AP68543 259 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
LINC00661-207ENST00000552685 SLAIN1Q8ND83 568 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 U2AF1L4Q8WU68 220 aaKnown RBP12.15□□□□□ -0.46
LINC00661-207ENST00000552685 DPF3Q92784 378 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 DNAJC18Q9H819 358 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 GPR108Q9NPR9 543 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
LINC00661-207ENST00000552685 FLT1P17948 1338 aa12.14□□□□□ -0.47
LINC00661-207ENST00000552685 USP17L5A8MUK1 530 aa12.14□□□□□ -0.47
LINC00661-207ENST00000552685 BAG3O95817 575 aa12.14□□□□□ -0.47
LINC00661-207ENST00000552685 PROCA1Q8NCQ7 364 aaPredicted RBP12.14□□□□□ -0.47
LINC00661-207ENST00000552685 EAF2Q96CJ1 260 aaPredicted RBP12.14□□□□□ -0.47
LINC00661-207ENST00000552685 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
LINC00661-207ENST00000552685 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
LINC00661-207ENST00000552685 SOX1O00570 391 aaPredicted RBP12.13□□□□□ -0.47
LINC00661-207ENST00000552685 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
LINC00661-207ENST00000552685 FARP2O94887 1054 aaPredicted RBP12.13□□□□□ -0.47
LINC00661-207ENST00000552685 CYP7A1P22680 504 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 PPP4CP60510 307 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 MTMR2Q13614 643 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 PANK1Q8TE04 598 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 COA7Q96BR5 231 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 DEFB118Q96PH6 123 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 PI4KBQ9UBF8 816 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 HERC5Q9UII4 1024 aaKnown RBP12.13□□□□□ -0.47
LINC00661-207ENST00000552685 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 NOP58Q9Y2X3 529 aaKnown RBP12.13□□□□□ -0.47
LINC00661-207ENST00000552685 FOCADQ5VW36 1801 aa12.13□□□□□ -0.47
LINC00661-207ENST00000552685 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
LINC00661-207ENST00000552685 SGPL1O95470 568 aa12.12□□□□□ -0.47
LINC00661-207ENST00000552685 PLCG2P16885 1265 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms