RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 KINO60870 393 aaKnown RBP12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 TADA3O75528 432 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 OAS2P29728 719 aaKnown RBP12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 ACTN2P35609 894 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 MMP14P50281 582 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 RESTQ13127 1097 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 RASGRF1Q13972 1273 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 TPTE2Q6XPS3 522 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 DHX40Q8IX18 779 aaKnown RBP12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 NEK11Q8NG66 645 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 NBPF3Q9H094 633 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 LRRC4BQ9NT99 713 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 COL4A1P02462 1669 aa12.66□□□□□ -0.38
TUBA1C-209ENST00000552448 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 POLR3GO15318 223 aaPredicted RBP12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 MYO1BO43795 1136 aa12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 AXDND1Q5T1B0 1012 aaPredicted RBP12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 SMARCE1Q969G3 411 aa12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 NCOA5Q9HCD5 579 aaKnown RBP12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 MKRN1Q9UHC7 482 aaKnown RBP12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 CARMIL3Q8ND23 1372 aa12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 DOCK2Q92608 1830 aa12.65□□□□□ -0.38
TUBA1C-209ENST00000552448 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 PRC1O43663 620 aa12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 MAGEA9P43362 315 aa12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 ANTXR2P58335 489 aa12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 ARID5BQ14865 1188 aa12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 NAA16Q6N069 864 aaPredicted RBP12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 CC2D1AQ6P1N0 951 aaPredicted RBP12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 C11orf57Q6ZUT1 292 aaPredicted RBP12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 NBPF5PQ86XG9 351 aaPredicted RBP12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 NCOA7Q8NI08 942 aa12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 STRBPQ96SI9 672 aaKnown RBP12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 RRP15Q9Y3B9 282 aaKnown RBP12.65□□□□□ -0.39
TUBA1C-209ENST00000552448 H3BQV1 296 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 GUCY2CP25092 1073 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 CHRNDQ07001 517 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 BRD3Q15059 726 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 RABGGTAQ92696 567 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 ZNF396Q96N95 335 aaPredicted RBP12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 MYCBPQ99417 103 aaPredicted RBP12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 TFIP11Q9UBB9 837 aaKnown RBP12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 SRP68Q9UHB9 627 aaKnown RBP12.64□□□□□ -0.39
TUBA1C-209ENST00000552448 NPHP1O15259 732 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 SMC2O95347 1197 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 TBC1D8O95759 1140 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 BCAMP50895 628 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 FAM160A1Q05DH4 1040 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 NLRP3Q96P20 1036 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 NCAPGQ9BPX3 1015 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 A0A1B0GUL6 1792 aa12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 TNS1Q9HBL0 1735 aaKnown RBP12.63□□□□□ -0.39
TUBA1C-209ENST00000552448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 CBFA2T2O43439 604 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 EIF3JO75822 258 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 TUBBP07437 444 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 ALX1Q15699 326 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 TXNRD1Q16881 649 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 TBC1D10CQ8IV04 446 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 C10orf67Q8IYJ2 551 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 MAGEB6Q8N7X4 407 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 HNRNPLLQ8WVV9 542 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 AIDAQ96BJ3 306 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 ZMYM6O95789 1325 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 CCDC151A5D8V7 595 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 APPP05067 770 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 FDPSP14324 419 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 TUBB2AQ13885 445 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 TUBB2BQ9BVA1 445 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 ADAM21Q9UKJ8 722 aa12.62□□□□□ -0.39
TUBA1C-209ENST00000552448 KLF18A0A0U1RQI7 1052 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms