RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 MOB2Q70IA6 237 aa15.76■□□□□ 0.11
CDK4-212ENST00000552388 DCP1AQ9NPI6 582 aaPredicted RBP15.76■□□□□ 0.11
CDK4-212ENST00000552388 SAGE1Q9NXZ1 904 aa15.76■□□□□ 0.11
CDK4-212ENST00000552388 SLC4A4Q9Y6R1 1079 aa15.76■□□□□ 0.11
CDK4-212ENST00000552388 A0A0D9SFI3 127 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 UBE2Q2LH0YL09 131 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 PRKAB2O43741 272 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 TBC1D12O60347 775 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 GNAT2P19087 354 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 IREB2P48200 963 aaKnown RBP15.75■□□□□ 0.11
CDK4-212ENST00000552388 GRM1Q13255 1194 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 NMIQ13287 307 aaPredicted RBP15.75■□□□□ 0.11
CDK4-212ENST00000552388 LDLRAD1Q5T700 205 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 MIGA2Q7L4E1 593 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 FAM227BQ96M60 508 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 ZNF341Q9BYN7 854 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 PI4KBQ9UBF8 816 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 PALD1Q9ULE6 856 aa15.75■□□□□ 0.11
CDK4-212ENST00000552388 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
CDK4-212ENST00000552388 BMP2KLQ5H9B9 411 aa15.74■□□□□ 0.11
CDK4-212ENST00000552388 GIMAP6Q6P9H5 292 aa15.74■□□□□ 0.11
CDK4-212ENST00000552388 METTL16Q86W50 562 aaKnown RBP15.74■□□□□ 0.11
CDK4-212ENST00000552388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.74■□□□□ 0.111e-7■■■■□ 25.5
CDK4-212ENST00000552388 ZNF112Q9UJU3 913 aa15.74■□□□□ 0.11
CDK4-212ENST00000552388 PHIPQ8WWQ0 1821 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 CCDC85CA6NKD9 419 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 GSG1L2A8MUP6 293 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 RGMBQ6NW40 437 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 TTC6Q86TZ1 520 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 FOXP4Q8IVH2 680 aaPredicted RBP15.73■□□□□ 0.11
CDK4-212ENST00000552388 ANKRD13AQ8IZ07 590 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 EHD4Q9H223 541 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 DIAPH3Q9NSV4 1193 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 MCM9Q9NXL9 1143 aa15.73■□□□□ 0.11
CDK4-212ENST00000552388 SAP30BPQ9UHR5 308 aaKnown RBP15.73■□□□□ 0.11
CDK4-212ENST00000552388 HERC5Q9UII4 1024 aaKnown RBP15.73■□□□□ 0.11
CDK4-212ENST00000552388 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
CDK4-212ENST00000552388 MAP3K9P80192 1104 aa15.72■□□□□ 0.11
CDK4-212ENST00000552388 CWC27Q6UX04 472 aaKnown RBP15.72■□□□□ 0.11
CDK4-212ENST00000552388 CCDC129Q6ZRS4 1044 aa15.72■□□□□ 0.11
CDK4-212ENST00000552388 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.72■□□□□ 0.11
CDK4-212ENST00000552388 DDRGK1Q96HY6 314 aa15.72■□□□□ 0.11
CDK4-212ENST00000552388 LAMA4Q16363 1823 aa15.72■□□□□ 0.11
CDK4-212ENST00000552388 CCDC171Q6TFL3 1326 aa15.71■□□□□ 0.11
CDK4-212ENST00000552388 PHF20L1A8MW92 1017 aa15.71■□□□□ 0.11
CDK4-212ENST00000552388 POLR3DP05423 398 aaPredicted RBP15.71■□□□□ 0.11
CDK4-212ENST00000552388 SLC10A3P09131 477 aa15.71■□□□□ 0.11
CDK4-212ENST00000552388 SLURP2P0DP57 97 aa15.71■□□□□ 0.11
CDK4-212ENST00000552388 PLCD1P51178 756 aa15.71■□□□□ 0.11
CDK4-212ENST00000552388 ZNF589Q86UQ0 364 aaPredicted RBP15.71■□□□□ 0.11
CDK4-212ENST00000552388 IFNL3Q8IZI9 196 aa15.71■□□□□ 0.11
CDK4-212ENST00000552388 WRNIP1Q96S55 665 aa15.71■□□□□ 0.11
CDK4-212ENST00000552388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.71■□□□□ 0.11
CDK4-212ENST00000552388 EPB41L4AQ9HCS5 686 aaPredicted RBP15.71■□□□□ 0.11
CDK4-212ENST00000552388 PTPRFP10586 1907 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 FAM196BA6NMK8 535 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 USP17L12C9JPN9 530 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 USP17L21D6R901 530 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 FOXP2O15409 715 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 CHMLP26374 656 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
CDK4-212ENST00000552388 SLC4A8Q2Y0W8 1093 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 SBK1Q52WX2 424 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 C12orf60Q5U649 245 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 AMOTL1Q8IY63 956 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 CRACR2BQ8N4Y2 399 aaPredicted RBP15.7■□□□□ 0.1
CDK4-212ENST00000552388 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 DNAJC18Q9H819 358 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
CDK4-212ENST00000552388 SERPINB13Q9UIV8 391 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 TAOK2Q9UL54 1235 aa15.7■□□□□ 0.1
CDK4-212ENST00000552388 RAD50Q92878 1312 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 APPP05067 770 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 INPP5BP32019 993 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 ZNF157P51786 506 aaPredicted RBP15.69■□□□□ 0.1
CDK4-212ENST00000552388 GABPAQ06546 454 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 DGKZQ13574 1117 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 VGLL4Q14135 290 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 NOL9Q5SY16 702 aaKnown RBP15.69■□□□□ 0.1
CDK4-212ENST00000552388 VPS53Q5VIR6 699 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 CTR9Q6PD62 1173 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 RASAL3Q86YV0 1011 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 CLMNQ96JQ2 1002 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 NACAP1Q9BZK3 213 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 CSADQ9Y600 493 aa15.69■□□□□ 0.1
CDK4-212ENST00000552388 CTNND1O60716 968 aaKnown RBP15.68■□□□□ 0.1
CDK4-212ENST00000552388 CYP2D6P10635 497 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 HSPD1P10809 573 aaKnown RBP15.68■□□□□ 0.1
CDK4-212ENST00000552388 TDO2P48775 406 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 EVX2Q03828 476 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 RUFY2Q8WXA3 655 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 ZKSCAN4Q969J2 545 aaPredicted RBP15.68■□□□□ 0.1
CDK4-212ENST00000552388 SLC10A4Q96EP9 437 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 TRIM34Q9BYJ4 488 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 NAPBQ9H115 298 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 SNCAIPQ9Y6H5 919 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 ZMYM6O95789 1325 aa15.68■□□□□ 0.1
CDK4-212ENST00000552388 ROBO3Q96MS0 1386 aa15.67■□□□□ 0.1
CDK4-212ENST00000552388 GREB1LQ9C091 1923 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms