RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 PTPN12Q05209 780 aaKnown RBP5□□□□□ -1.61
CPNE8-208ENST00000551855 SF3B2Q13435 895 aaKnown RBP5□□□□□ -1.61
CPNE8-208ENST00000551855 NKPD1Q17RQ9 610 aa5□□□□□ -1.61
CPNE8-208ENST00000551855 UBE3DQ7Z6J8 389 aa5□□□□□ -1.61
CPNE8-208ENST00000551855 PDZD3Q86UT5 571 aa5□□□□□ -1.61
CPNE8-208ENST00000551855 GLYCTKQ8IVS8 523 aa5□□□□□ -1.61
CPNE8-208ENST00000551855 SPACA3Q8IXA5 215 aa5□□□□□ -1.61
CPNE8-208ENST00000551855 KRT82Q9NSB4 513 aa5□□□□□ -1.61
CPNE8-208ENST00000551855 SNX11Q9Y5W9 270 aa5□□□□□ -1.61
CPNE8-208ENST00000551855 TMEM238LA0A1B0GVL6 79 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 GLI1P08151 1106 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 ARHGAP4P98171 946 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 TTLL10Q6ZVT0 673 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 ANKLE2Q86XL3 938 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 SIAH1Q8IUQ4 282 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.99□□□□□ -1.61
CPNE8-208ENST00000551855 ZSCAN18Q8TBC5 510 aaPredicted RBP4.99□□□□□ -1.61
CPNE8-208ENST00000551855 ASB11Q8WXH4 323 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 KCNB2Q92953 911 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 SSU72Q9NP77 194 aaKnown RBP4.99□□□□□ -1.61
CPNE8-208ENST00000551855 RNF19AQ9NV58 838 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 C19orf73Q9NVV2 129 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 USP35Q9P2H5 1018 aa4.99□□□□□ -1.61
CPNE8-208ENST00000551855 ZC3H12AQ5D1E8 599 aaKnown RBP4.98□□□□□ -1.61
CPNE8-208ENST00000551855 RPS26P11Q5JNZ5 115 aaPredicted RBP4.98□□□□□ -1.61
CPNE8-208ENST00000551855 MPRIPQ6WCQ1 1025 aa4.98□□□□□ -1.61
CPNE8-208ENST00000551855 PITPNM2Q9BZ72 1349 aa4.97□□□□□ -1.61
CPNE8-208ENST00000551855 CPNE3O75131 537 aaKnown RBP4.97□□□□□ -1.61
CPNE8-208ENST00000551855 AFMP43652 599 aa4.97□□□□□ -1.61
CPNE8-208ENST00000551855 PRPF40BQ6NWY9 871 aaKnown RBP4.97□□□□□ -1.61
CPNE8-208ENST00000551855 MPZL3Q6UWV2 235 aa4.97□□□□□ -1.61
CPNE8-208ENST00000551855 FBXO33Q7Z6M2 555 aa4.97□□□□□ -1.61
CPNE8-208ENST00000551855 RNF214Q8ND24 703 aa4.97□□□□□ -1.61
CPNE8-208ENST00000551855 KIRREL1Q96J84 757 aa4.97□□□□□ -1.61
CPNE8-208ENST00000551855 PPP1R16BQ96T49 567 aa4.97□□□□□ -1.61
CPNE8-208ENST00000551855 NPIPB6E9PJ23 425 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 IGF2BP3O00425 579 aaKnown RBP eCLIP4.96□□□□□ -1.62
CPNE8-208ENST00000551855 GADD45BO75293 160 aaPredicted RBP4.96□□□□□ -1.62
CPNE8-208ENST00000551855 EOMESO95936 686 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 NTF4P34130 210 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 GRM2Q14416 872 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 PPM1JQ5JR12 505 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 CCDC74AQ96AQ1 378 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 DIRC2Q96SL1 478 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 PRDM10Q9NQV6 1147 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 EGFL7Q9UHF1 273 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 CSADQ9Y600 493 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 CNTNAP4Q9C0A0 1308 aa4.96□□□□□ -1.62
CPNE8-208ENST00000551855 INHBBP09529 407 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 ERVK-24P63145 666 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 TMEM67Q5HYA8 995 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 CYFIP1Q7L576 1253 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 GPBAR1Q8TDU6 330 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 EPS8L3Q8TE67 593 aaKnown RBP4.95□□□□□ -1.62
CPNE8-208ENST00000551855 SETDB2Q96T68 719 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 NSUN3Q9H649 340 aaKnown RBP4.95□□□□□ -1.62
CPNE8-208ENST00000551855 CARS2Q9HA77 564 aaKnown RBP4.95□□□□□ -1.62
CPNE8-208ENST00000551855 GTF2IRD1Q9UHL9 959 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 GPN3Q9UHW5 284 aaPredicted RBP4.95□□□□□ -1.62
CPNE8-208ENST00000551855 DCTN4Q9UJW0 460 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 BRPF3Q9ULD4 1205 aa4.95□□□□□ -1.62
CPNE8-208ENST00000551855 PRR33A8MZF0 331 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 EIF1AYO14602 144 aaKnown RBP4.94□□□□□ -1.62
CPNE8-208ENST00000551855 FCGRTP55899 365 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 MAP1SQ66K74 1059 aaPredicted RBP4.94□□□□□ -1.62
CPNE8-208ENST00000551855 AMIGO3Q86WK7 504 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 SULF2Q8IWU5 870 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 FBXO15Q8NCQ5 510 aaPredicted RBP4.94□□□□□ -1.62
CPNE8-208ENST00000551855 C20orf173Q96LM9 149 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 FAM161BQ96MY7 647 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 ASB16Q96NS5 453 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 ATP13A1Q9HD20 1204 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 SEMA3GQ9NS98 782 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 TMEM39AQ9NV64 488 aa4.94□□□□□ -1.62
CPNE8-208ENST00000551855 ADAMTS20P59510 1910 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 NFIBO00712 420 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 GPR182O15218 404 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 RECKO95980 971 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 IGHA2P01877 340 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 NEFLP07196 543 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 P4HBP07237 508 aaKnown RBP4.93□□□□□ -1.62
CPNE8-208ENST00000551855 ERCC3P19447 782 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 ARNTP27540 789 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 C9orf131Q5VYM1 1079 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 PI16Q6UXB8 463 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 DTHD1Q6ZMT9 781 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 TMC7Q7Z402 723 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 HSPA12BQ96MM6 686 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 FAM129BQ96TA1 746 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 NIF3L1Q9GZT8 377 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 WWC3Q9ULE0 1092 aa4.93□□□□□ -1.62
CPNE8-208ENST00000551855 DCDC2CA8MYV0 355 aa4.92□□□□□ -1.62
CPNE8-208ENST00000551855 CLCN7P51798 805 aa4.92□□□□□ -1.62
CPNE8-208ENST00000551855 ZNF252P-AS1Q0IIN9 211 aa4.92□□□□□ -1.62
CPNE8-208ENST00000551855 KCNA10Q16322 511 aa4.92□□□□□ -1.62
CPNE8-208ENST00000551855 TSNAXIP1Q2TAA8 658 aa4.92□□□□□ -1.62
CPNE8-208ENST00000551855 ATG14Q6ZNE5 492 aa4.92□□□□□ -1.62
CPNE8-208ENST00000551855 C12orf40Q86WS4 652 aa4.92□□□□□ -1.62
CPNE8-208ENST00000551855 GRIN3AQ8TCU5 1115 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms