RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 EIF4EBP3O60516 100 aaPredicted RBP6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 KRT1P04264 644 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 GRM2Q14416 872 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 AOC3Q16853 763 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 ZNF423Q2M1K9 1284 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 NXPE4Q6UWF7 544 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 ANKLE2Q86XL3 938 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 PPP1R16BQ96T49 567 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 EHD4Q9H223 541 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 FAM8A1Q9UBU6 413 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 AP4E1Q9UPM8 1137 aa6.23□□□□□ -1.41
TSPAN8-205ENST00000550818 ECEL1O95672 775 aa6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 USP17L7P0C7H9 530 aa6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 FAM87AP0C7U9 286 aa6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 CDK5R2Q13319 367 aa6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 KCNMB1Q16558 191 aa6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 PRPF40BQ6NWY9 871 aaKnown RBP6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 SLC23A3Q6PIS1 610 aa6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 TRAK1Q9UPV9 953 aa6.22□□□□□ -1.41
TSPAN8-205ENST00000550818 CYP11A1P05108 521 aa6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 HDLBPQ00341 1268 aaKnown RBP6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 FANCCQ00597 558 aa6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 POU4F3Q15319 338 aa6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 IFI16Q16666 785 aaKnown RBP6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 SYDE1Q6ZW31 735 aaPredicted RBP6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 PRDM7Q9NQW5 492 aa6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 RAD18Q9NS91 495 aa6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 PPP4R2Q9NY27 417 aa6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 PLAGL2Q9UPG8 496 aa6.21□□□□□ -1.42
TSPAN8-205ENST00000550818 USP31Q70CQ4 1352 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 C1QTNF9P0C862 333 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 GSTT1P30711 240 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 ZNF76P36508 570 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 METTL16Q86W50 562 aaKnown RBP6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 AMIGO3Q86WK7 504 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 RNF34Q969K3 372 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 HRASLS5Q96KN8 279 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 TCF12Q99081 682 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 LIN7BQ9HAP6 207 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 ABCB6Q9NP58 842 aa6.2□□□□□ -1.42
TSPAN8-205ENST00000550818 ST13P50502 369 aaKnown RBP6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 OXCT1P55809 520 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 PCDH1Q08174 1060 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 TAF1CQ15572 869 aaPredicted RBP6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 HP1BP3Q5SSJ5 553 aaPredicted RBP6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 ANGEL2Q5VTE6 544 aaKnown RBP6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 FYB2Q5VWT5 728 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 C9orf131Q5VYM1 1079 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 PRR23BQ6ZRT6 265 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 CCNJLQ8IV13 435 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 C3orf58Q8NDZ4 430 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 TRIM56Q9BRZ2 755 aaKnown RBP6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 MKNK2Q9HBH9 465 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 PPP1R9AQ9ULJ8 1098 aa6.19□□□□□ -1.42
TSPAN8-205ENST00000550818 TMEM238LA0A1B0GVL6 79 aa6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 AOC2O75106 756 aa6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 INHBBP09529 407 aa6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 ERCC5P28715 1186 aaPredicted RBP6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 FCGRTP55899 365 aa6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 MEI1Q5TIA1 1274 aa6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 NT5DC4Q86YG4 428 aa6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 CTNND2Q9UQB3 1225 aa6.18□□□□□ -1.42
TSPAN8-205ENST00000550818 TMEM265A0A087WTH1 108 aa6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 LEFTY1O75610 366 aa6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 CEACAM5P06731 702 aa6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 XRCC5P13010 732 aaKnown RBP6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 PTPN12Q05209 780 aaKnown RBP6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 RAD51AP2Q09MP3 1159 aa6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 ANKRD24Q8TF21 1146 aa6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 WDR18Q9BV38 432 aa6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 CLEC4MQ9H2X3 399 aaPredicted RBP6.17□□□□□ -1.42
TSPAN8-205ENST00000550818 A0A096LPE4 126 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 A0A1W2PPZ6 126 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 ITPKAP23677 461 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 GRIA4P48058 902 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 CTSWP56202 376 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 C8orf37Q96NL8 207 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 ZFYVE1Q9HBF4 777 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 PPM1HQ9ULR3 514 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 TTF2Q9UNY4 1162 aaKnown RBP6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 SYNGAP1Q96PV0 1343 aa6.16□□□□□ -1.42
TSPAN8-205ENST00000550818 ZC3H6P61129 1189 aaKnown RBP6.15□□□□□ -1.42
TSPAN8-205ENST00000550818 SPRED3Q2MJR0 410 aa6.15□□□□□ -1.42
TSPAN8-205ENST00000550818 HS2ST1Q7LGA3 356 aa6.15□□□□□ -1.42
TSPAN8-205ENST00000550818 C20orf173Q96LM9 149 aa6.15□□□□□ -1.42
TSPAN8-205ENST00000550818 CORO1BQ9BR76 489 aa6.15□□□□□ -1.42
TSPAN8-205ENST00000550818 TNKS2Q9H2K2 1166 aa6.15□□□□□ -1.42
TSPAN8-205ENST00000550818 AKAP2Q9Y2D5 859 aa6.15□□□□□ -1.42
TSPAN8-205ENST00000550818 NPIPB6E9PJ23 425 aa6.14□□□□□ -1.43
TSPAN8-205ENST00000550818 NOC4LQ9BVI4 516 aaKnown RBP6.14□□□□□ -1.43
TSPAN8-205ENST00000550818 DUSP23Q9BVJ7 150 aa6.14□□□□□ -1.43
TSPAN8-205ENST00000550818 TGIF2Q9GZN2 237 aa6.14□□□□□ -1.43
TSPAN8-205ENST00000550818 NFIBO00712 420 aa6.13□□□□□ -1.43
TSPAN8-205ENST00000550818 TMPRSS2O15393 492 aa6.13□□□□□ -1.43
TSPAN8-205ENST00000550818 GLI1P08151 1106 aa6.13□□□□□ -1.43
TSPAN8-205ENST00000550818 ZP2Q05996 745 aa6.13□□□□□ -1.43
TSPAN8-205ENST00000550818 ZNF576Q9H609 170 aa6.13□□□□□ -1.43
TSPAN8-205ENST00000550818 GGT7Q9UJ14 662 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms