RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 USP17L5A8MUK1 530 aa17.46■□□□□ 0.39
TPCN1-213ENST00000550543 H0YGN5 161 aa17.46■□□□□ 0.39
TPCN1-213ENST00000550543 FARP2O94887 1054 aaPredicted RBP17.46■□□□□ 0.39
TPCN1-213ENST00000550543 FLT3LGP49771 235 aa17.46■□□□□ 0.39
TPCN1-213ENST00000550543 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
TPCN1-213ENST00000550543 U2AF1L4Q8WU68 220 aaKnown RBP17.46■□□□□ 0.39
TPCN1-213ENST00000550543 FRAT1Q92837 279 aaPredicted RBP17.46■□□□□ 0.39
TPCN1-213ENST00000550543 ECM2O94769 699 aaPredicted RBP17.45■□□□□ 0.38
TPCN1-213ENST00000550543 SGPL1O95470 568 aa17.45■□□□□ 0.38
TPCN1-213ENST00000550543 ASNSP08243 561 aa17.45■□□□□ 0.38
TPCN1-213ENST00000550543 CAP2P40123 477 aa17.45■□□□□ 0.38
TPCN1-213ENST00000550543 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
TPCN1-213ENST00000550543 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
TPCN1-213ENST00000550543 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
TPCN1-213ENST00000550543 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
TPCN1-213ENST00000550543 COLQQ9Y215 455 aaPredicted RBP17.45■□□□□ 0.38
TPCN1-213ENST00000550543 FXR1P51114 621 aaKnown RBP eCLIP17.44■□□□□ 0.38
TPCN1-213ENST00000550543 SPP2Q13103 211 aa17.44■□□□□ 0.38
TPCN1-213ENST00000550543 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
TPCN1-213ENST00000550543 GTF3C2Q8WUA4 911 aaPredicted RBP17.44■□□□□ 0.38
TPCN1-213ENST00000550543 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
TPCN1-213ENST00000550543 TMOD4Q9NZQ9 345 aa17.44■□□□□ 0.38
TPCN1-213ENST00000550543 DOCK1Q14185 1865 aa17.44■□□□□ 0.38
TPCN1-213ENST00000550543 INHAP05111 366 aa17.43■□□□□ 0.38
TPCN1-213ENST00000550543 PPP4CP60510 307 aa17.43■□□□□ 0.38
TPCN1-213ENST00000550543 SH3D19Q5HYK7 790 aa17.43■□□□□ 0.38
TPCN1-213ENST00000550543 UBE2Q1Q7Z7E8 422 aa17.43■□□□□ 0.38
TPCN1-213ENST00000550543 ANKRD13CQ8N6S4 541 aa17.43■□□□□ 0.38
TPCN1-213ENST00000550543 WDR18Q9BV38 432 aa17.43■□□□□ 0.38
TPCN1-213ENST00000550543 CEP290O15078 2479 aa17.43■□□□□ 0.38
TPCN1-213ENST00000550543 C19orf81C9J6K1 198 aa17.42■□□□□ 0.38
TPCN1-213ENST00000550543 TFRCP02786 760 aaKnown RBP17.42■□□□□ 0.38
TPCN1-213ENST00000550543 HLA-DOAP06340 250 aa17.42■□□□□ 0.38
TPCN1-213ENST00000550543 MCAMP43121 646 aa17.42■□□□□ 0.38
TPCN1-213ENST00000550543 IRX3P78415 501 aaPredicted RBP17.42■□□□□ 0.38
TPCN1-213ENST00000550543 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
TPCN1-213ENST00000550543 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
TPCN1-213ENST00000550543 CRACR2BQ8N4Y2 399 aaPredicted RBP17.42■□□□□ 0.38
TPCN1-213ENST00000550543 UNC93B1Q9H1C4 597 aa17.42■□□□□ 0.38
TPCN1-213ENST00000550543 GABRQQ9UN88 632 aa17.42■□□□□ 0.38
TPCN1-213ENST00000550543 CENPFP49454 3210 aa17.42■□□□□ 0.38
TPCN1-213ENST00000550543 A0A1W2PPC1 479 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 HMGCRP04035 888 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 HMGCS2P54868 508 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 TNNI3KQ59H18 835 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 TRMT44Q8IYL2 757 aaKnown RBP17.41■□□□□ 0.38
TPCN1-213ENST00000550543 ANKLE1Q8NAG6 615 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 ZNF384Q8TF68 577 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 TAOK2Q9UL54 1235 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 FPGT-TNNI3KV9GXZ4 949 aa17.41■□□□□ 0.38
TPCN1-213ENST00000550543 MKI67P46013 3256 aaKnown RBP17.4■□□□□ 0.38
TPCN1-213ENST00000550543 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
TPCN1-213ENST00000550543 BACE1P56817 501 aa17.4■□□□□ 0.38
TPCN1-213ENST00000550543 POLA2Q14181 598 aa17.4■□□□□ 0.38
TPCN1-213ENST00000550543 TREML2Q5T2D2 321 aa17.4■□□□□ 0.38
TPCN1-213ENST00000550543 SSH3Q8TE77 659 aa17.4■□□□□ 0.38
TPCN1-213ENST00000550543 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
TPCN1-213ENST00000550543 PAK6Q9NQU5 681 aaPredicted RBP17.4■□□□□ 0.38
TPCN1-213ENST00000550543 EVI5O60447 810 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
TPCN1-213ENST00000550543 ELNP15502 786 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
TPCN1-213ENST00000550543 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 PI16Q6UXB8 463 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 CHRDL2Q6WN34 429 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 NECAB2Q7Z6G3 386 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 CCAR1Q8IX12 1150 aaKnown RBP17.39■□□□□ 0.37
TPCN1-213ENST00000550543 SH3RF3Q8TEJ3 882 aaPredicted RBP17.39■□□□□ 0.37
TPCN1-213ENST00000550543 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 DEFB118Q96PH6 123 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 ASCC2Q9H1I8 757 aaPredicted RBP17.39■□□□□ 0.37
TPCN1-213ENST00000550543 AATFQ9NY61 560 aaKnown RBP eCLIP17.39■□□□□ 0.37
TPCN1-213ENST00000550543 MORF4L1Q9UBU8 362 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 ZSWIM8A7E2V4 1837 aa17.39■□□□□ 0.37
TPCN1-213ENST00000550543 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
TPCN1-213ENST00000550543 METTL16Q86W50 562 aaKnown RBP17.38■□□□□ 0.37
TPCN1-213ENST00000550543 ERC1Q8IUD2 1116 aa17.38■□□□□ 0.37
TPCN1-213ENST00000550543 CRISPLD2Q9H0B8 497 aa17.38■□□□□ 0.37
TPCN1-213ENST00000550543 HMX1Q9NP08 348 aaPredicted RBP17.38■□□□□ 0.37
TPCN1-213ENST00000550543 FAM196BA6NMK8 535 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 USP17L10C9JJH3 530 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 ZBTB7BO15156 539 aaPredicted RBP17.37■□□□□ 0.37
TPCN1-213ENST00000550543 BCAR3O75815 825 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 MAPK4P31152 587 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 GPRC5AQ8NFJ5 357 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 TGFBRAP1Q8WUH2 860 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.37
TPCN1-213ENST00000550543 NOP58Q9Y2X3 529 aaKnown RBP17.37■□□□□ 0.37
TPCN1-213ENST00000550543 FLT1P17948 1338 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 RPTORQ8N122 1335 aa17.37■□□□□ 0.37
TPCN1-213ENST00000550543 TRIOBPQ9H2D6 2365 aa17.36■□□□□ 0.37
TPCN1-213ENST00000550543 MGAMO43451 1857 aa17.36■□□□□ 0.37
TPCN1-213ENST00000550543 XRCC5P13010 732 aaKnown RBP17.36■□□□□ 0.37
TPCN1-213ENST00000550543 MTMR2Q13614 643 aa17.36■□□□□ 0.37
TPCN1-213ENST00000550543 HSP90AB4PQ58FF6 505 aa17.36■□□□□ 0.37
TPCN1-213ENST00000550543 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
TPCN1-213ENST00000550543 NUDT12Q9BQG2 462 aa17.36■□□□□ 0.37
TPCN1-213ENST00000550543 DBNDD2Q9BQY9 259 aa17.36■□□□□ 0.37
TPCN1-213ENST00000550543 SNRKQ9NRH2 765 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms