RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 GRIN1Q05586 938 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 THEMISQ8N1K5 641 aaPredicted RBP13.73□□□□□ -0.21
VDR-208ENST00000550325 MAST3O60307 1309 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 A0A087WZG4 1122 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 HNRNPH1P31943 449 aaKnown RBP13.73□□□□□ -0.21
VDR-208ENST00000550325 SLC26A6Q9BXS9 759 aa13.73□□□□□ -0.21
VDR-208ENST00000550325 USP5P45974 858 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 ATP2B2Q01814 1243 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 KRI1Q8N9T8 703 aaKnown RBP13.72□□□□□ -0.21
VDR-208ENST00000550325 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 GBP6Q6ZN66 633 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
VDR-208ENST00000550325 DSCC1Q9BVC3 393 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 ROBO2Q9HCK4 1378 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 PLEKHG3A1L390 1219 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 GCKRQ14397 625 aa13.72□□□□□ -0.21
VDR-208ENST00000550325 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
VDR-208ENST00000550325 SETD1BQ9UPS6 1966 aaKnown RBP13.72□□□□□ -0.21
VDR-208ENST00000550325 TMEM131LA2VDJ0 1609 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 GOLGA6BA6NDN3 693 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 ZNF213O14771 459 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.21
VDR-208ENST00000550325 CCDC172P0C7W6 258 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 ATP1A2P50993 1020 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 PTPN12Q05209 780 aaKnown RBP13.71□□□□□ -0.21
VDR-208ENST00000550325 JADE2Q9NQC1 790 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 DENND2AQ9ULE3 1009 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 RNF113AO15541 343 aaKnown RBP13.71□□□□□ -0.21
VDR-208ENST00000550325 A1BGP04217 495 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 IARSP41252 1262 aaKnown RBP13.71□□□□□ -0.21
VDR-208ENST00000550325 FXR1P51114 621 aaKnown RBP eCLIP13.71□□□□□ -0.21
VDR-208ENST00000550325 RESP18Q5W5W9 173 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 GPIHBP1Q8IV16 184 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 MLKLQ8NB16 471 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 NCOA7Q8NI08 942 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 KCNJ14Q9UNX9 436 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
VDR-208ENST00000550325 NDUFAB1O14561 156 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 RPS6KA5O75582 802 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.21
VDR-208ENST00000550325 SND1Q7KZF4 910 aaKnown RBP eCLIP13.71□□□□□ -0.21
VDR-208ENST00000550325 KIAA1328Q86T90 577 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 ARHGEF25Q86VW2 580 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 OTUD6BQ8N6M0 293 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 CAPS2Q9BXY5 557 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 HPCAL4Q9UM19 191 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 SUFUQ9UMX1 484 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 MAPK8IP1Q9UQF2 711 aa13.71□□□□□ -0.21
VDR-208ENST00000550325 TDO2P48775 406 aa13.71□□□□□ -0.22
VDR-208ENST00000550325 SAFBQ15424 915 aaKnown RBP eCLIP13.71□□□□□ -0.22
VDR-208ENST00000550325 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.22
VDR-208ENST00000550325 ZNF594Q96JF6 807 aaPredicted RBP13.71□□□□□ -0.22
VDR-208ENST00000550325 MYO1FO00160 1098 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
VDR-208ENST00000550325 TSR1Q2NL82 804 aaKnown RBP13.7□□□□□ -0.22
VDR-208ENST00000550325 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 PANX2Q96RD6 677 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 MMS19Q96T76 1030 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 PSMB7Q99436 277 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 CEP83Q9Y592 693 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 FAM208AQ9UK61 1670 aaKnown RBP13.7□□□□□ -0.22
VDR-208ENST00000550325 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 HOXB7P09629 217 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 NR1I3Q14994 352 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 KCTD16Q68DU8 428 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 ENOX1Q8TC92 643 aaKnown RBP13.7□□□□□ -0.22
VDR-208ENST00000550325 TAB2Q9NYJ8 693 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 HPS5Q9UPZ3 1129 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 A0A0G2JS52 829 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 BTBD18B2RXH4 712 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 MFAP3LO75121 409 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 FGAP02671 866 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 KRT9P35527 623 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 IRAK1P51617 712 aa13.7□□□□□ -0.22
VDR-208ENST00000550325 CMTR1Q8N1G2 835 aaKnown RBP13.7□□□□□ -0.22
VDR-208ENST00000550325 SYNRGQ9UMZ2 1314 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
VDR-208ENST00000550325 CCDC122Q5T0U0 273 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 USP49Q70CQ1 688 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 CNGA4Q8IV77 575 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 HPSEQ9Y251 543 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 AGLP35573 1532 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 ZMYM1Q5SVZ6 1142 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 ANKRD18AQ8IVF6 992 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 PCMTD1Q96MG8 357 aaPredicted RBP13.69□□□□□ -0.22
VDR-208ENST00000550325 GNL3LQ9NVN8 582 aaKnown RBP13.69□□□□□ -0.22
VDR-208ENST00000550325 CTNND2Q9UQB3 1225 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 ZNF330Q9Y3S2 320 aaPredicted RBP13.69□□□□□ -0.22
VDR-208ENST00000550325 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 PPP6R2O75170 966 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 CEP57Q86XR8 500 aa13.69□□□□□ -0.22
VDR-208ENST00000550325 SUGP1Q8IWZ8 645 aaKnown RBP13.69□□□□□ -0.22
VDR-208ENST00000550325 SELENOOQ9BVL4 669 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms