RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 MYCP01106 439 aaPredicted RBP19.5■□□□□ 0.71
COX6A1-203ENST00000550009 ANKRD23Q86SG2 305 aa19.5■□□□□ 0.71
COX6A1-203ENST00000550009 MIGA1Q8NAN2 632 aa19.5■□□□□ 0.71
COX6A1-203ENST00000550009 DNAJC18Q9H819 358 aa19.5■□□□□ 0.71
COX6A1-203ENST00000550009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.5■□□□□ 0.71
COX6A1-203ENST00000550009 SAP30BPQ9UHR5 308 aaKnown RBP19.5■□□□□ 0.71
COX6A1-203ENST00000550009 BAZ2AQ9UIF9 1905 aaKnown RBP19.5■□□□□ 0.71
COX6A1-203ENST00000550009 NAV1Q8NEY1 1877 aa19.5■□□□□ 0.71
COX6A1-203ENST00000550009 A0A0G2JLL6 359 aaPredicted RBP19.49■□□□□ 0.71
COX6A1-203ENST00000550009 TRIM75PA6NK02 468 aa19.49■□□□□ 0.71
COX6A1-203ENST00000550009 LACTBP83111 547 aaPredicted RBP19.49■□□□□ 0.71
COX6A1-203ENST00000550009 SLFNL1Q499Z3 407 aa19.49■□□□□ 0.71
COX6A1-203ENST00000550009 GADL1Q6ZQY3 521 aa19.49■□□□□ 0.71
COX6A1-203ENST00000550009 PRRT2Q7Z6L0 340 aaPredicted RBP19.49■□□□□ 0.71
COX6A1-203ENST00000550009 RHPN1Q8TCX5 695 aa19.49■□□□□ 0.71
COX6A1-203ENST00000550009 EDC3Q96F86 508 aaKnown RBP19.49■□□□□ 0.71
COX6A1-203ENST00000550009 ZNF512BQ96KM6 892 aaPredicted RBP19.49■□□□□ 0.71
COX6A1-203ENST00000550009 DDX60LQ5H9U9 1706 aaKnown RBP19.48■□□□□ 0.71
COX6A1-203ENST00000550009 IDH1O75874 414 aaKnown RBP19.48■□□□□ 0.71
COX6A1-203ENST00000550009 CYP7A1P22680 504 aa19.48■□□□□ 0.71
COX6A1-203ENST00000550009 PICK1Q9NRD5 415 aa19.48■□□□□ 0.71
COX6A1-203ENST00000550009 PALD1Q9ULE6 856 aa19.48■□□□□ 0.71
COX6A1-203ENST00000550009 FLT1P17948 1338 aa19.48■□□□□ 0.71
COX6A1-203ENST00000550009 COL2A1P02458 1487 aaPredicted RBP19.48■□□□□ 0.71
COX6A1-203ENST00000550009 CXCL11O14625 94 aa19.47■□□□□ 0.71
COX6A1-203ENST00000550009 CTNND1O60716 968 aaKnown RBP19.47■□□□□ 0.71
COX6A1-203ENST00000550009 NPM3O75607 178 aaKnown RBP19.47■□□□□ 0.71
COX6A1-203ENST00000550009 PPP4CP60510 307 aa19.47■□□□□ 0.71
COX6A1-203ENST00000550009 EVX2Q03828 476 aa19.47■□□□□ 0.71
COX6A1-203ENST00000550009 TREML2Q5T2D2 321 aa19.47■□□□□ 0.71
COX6A1-203ENST00000550009 MAGEB6Q8N7X4 407 aa19.47■□□□□ 0.71
COX6A1-203ENST00000550009 SH3TC2Q8TF17 1288 aa19.47■□□□□ 0.71
COX6A1-203ENST00000550009 TRIM47Q96LD4 638 aa19.47■□□□□ 0.71
COX6A1-203ENST00000550009 ZCCHC17Q9NP64 241 aaKnown RBP19.47■□□□□ 0.71
COX6A1-203ENST00000550009 TBC1D12O60347 775 aa19.46■□□□□ 0.71
COX6A1-203ENST00000550009 CHGBP05060 677 aa19.46■□□□□ 0.71
COX6A1-203ENST00000550009 EN2P19622 333 aaPredicted RBP19.45■□□□□ 0.7
COX6A1-203ENST00000550009 ARMC5Q96C12 935 aa19.45■□□□□ 0.7
COX6A1-203ENST00000550009 DDX19BQ9UMR2 479 aa19.45■□□□□ 0.7
COX6A1-203ENST00000550009 MYH8P13535 1937 aa19.45■□□□□ 0.7
COX6A1-203ENST00000550009 PLXNB2O15031 1838 aa19.44■□□□□ 0.7
COX6A1-203ENST00000550009 SMARCA5O60264 1052 aaPredicted RBP19.44■□□□□ 0.7
COX6A1-203ENST00000550009 PEX10O60683 326 aa19.44■□□□□ 0.7
COX6A1-203ENST00000550009 GDF11O95390 407 aa19.44■□□□□ 0.7
COX6A1-203ENST00000550009 BCRP11274 1271 aa19.44■□□□□ 0.7
COX6A1-203ENST00000550009 CAP2P40123 477 aa19.44■□□□□ 0.7
COX6A1-203ENST00000550009 PSMC4P43686 418 aa19.44■□□□□ 0.7
COX6A1-203ENST00000550009 SPP2Q13103 211 aa19.44■□□□□ 0.7
COX6A1-203ENST00000550009 NOL10Q9BSC4 688 aaKnown RBP19.44■□□□□ 0.7
COX6A1-203ENST00000550009 OSBPP22059 807 aa19.43■□□□□ 0.7
COX6A1-203ENST00000550009 ZNF333Q96JL9 665 aa19.43■□□□□ 0.7
COX6A1-203ENST00000550009 GABRQQ9UN88 632 aa19.43■□□□□ 0.7
COX6A1-203ENST00000550009 BAG3O95817 575 aa19.42■□□□□ 0.7
COX6A1-203ENST00000550009 HMGCS2P54868 508 aa19.42■□□□□ 0.7
COX6A1-203ENST00000550009 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
COX6A1-203ENST00000550009 RPAP2Q8IXW5 612 aaPredicted RBP19.42■□□□□ 0.7
COX6A1-203ENST00000550009 MAP4K4O95819 1239 aaPredicted RBP19.41■□□□□ 0.7
COX6A1-203ENST00000550009 SLC9C1Q4G0N8 1177 aa19.41■□□□□ 0.7
COX6A1-203ENST00000550009 KIF1BPQ96EK5 621 aa19.41■□□□□ 0.7
COX6A1-203ENST00000550009 PARK7Q99497 189 aaKnown RBP19.41■□□□□ 0.7
COX6A1-203ENST00000550009 DNAJC2Q99543 621 aaKnown RBP19.41■□□□□ 0.7
COX6A1-203ENST00000550009 PI4KBQ9UBF8 816 aa19.41■□□□□ 0.7
COX6A1-203ENST00000550009 GOLIM4O00461 696 aa19.4■□□□□ 0.7
COX6A1-203ENST00000550009 FMNL1O95466 1100 aaPredicted RBP19.4■□□□□ 0.7
COX6A1-203ENST00000550009 MS4A1P11836 297 aa19.4■□□□□ 0.7
COX6A1-203ENST00000550009 MTFR1Q15390 333 aa19.4■□□□□ 0.7
COX6A1-203ENST00000550009 FASTKD5Q7L8L6 764 aaKnown RBP19.4■□□□□ 0.7
COX6A1-203ENST00000550009 METTL16Q86W50 562 aaKnown RBP19.4■□□□□ 0.7
COX6A1-203ENST00000550009 RIOK1Q9BRS2 568 aaKnown RBP19.4■□□□□ 0.7
COX6A1-203ENST00000550009 SMIM22K7EJ46 135 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 PDE6AP16499 860 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 PLCG2P16885 1265 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 PRKCZQ05513 592 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 KIF22Q14807 665 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 ZNF280CQ8ND82 737 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 BOLA2Q9H3K6 86 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 SRRDQ9UH36 339 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 HERC5Q9UII4 1024 aaKnown RBP19.39■□□□□ 0.69
COX6A1-203ENST00000550009 AGTPBP1Q9UPW5 1226 aa19.39■□□□□ 0.69
COX6A1-203ENST00000550009 TCRBV5S4A2TA0A5A2 114 aa19.38■□□□□ 0.69
COX6A1-203ENST00000550009 USP17L5A8MUK1 530 aa19.38■□□□□ 0.69
COX6A1-203ENST00000550009 PLCD1P51178 756 aa19.38■□□□□ 0.69
COX6A1-203ENST00000550009 MTMR2Q13614 643 aa19.38■□□□□ 0.69
COX6A1-203ENST00000550009 CLASRPQ8N2M8 674 aaKnown RBP19.38■□□□□ 0.69
COX6A1-203ENST00000550009 ANKRD13CQ8N6S4 541 aa19.38■□□□□ 0.69
COX6A1-203ENST00000550009 MYPNQ86TC9 1320 aa19.37■□□□□ 0.69
COX6A1-203ENST00000550009 ZNF532Q9HCE3 1301 aa19.37■□□□□ 0.69
COX6A1-203ENST00000550009 IFIT2P09913 472 aaKnown RBP19.37■□□□□ 0.69
COX6A1-203ENST00000550009 USP5P45974 858 aa19.37■□□□□ 0.69
COX6A1-203ENST00000550009 MAP3K12Q12852 859 aa19.37■□□□□ 0.69
COX6A1-203ENST00000550009 HSP90AB4PQ58FF6 505 aa19.37■□□□□ 0.69
COX6A1-203ENST00000550009 CRACR2BQ8N4Y2 399 aaPredicted RBP19.37■□□□□ 0.69
COX6A1-203ENST00000550009 DHX36Q9H2U1 1008 aaKnown RBP19.37■□□□□ 0.69
COX6A1-203ENST00000550009 HMMRO75330 724 aa19.36■□□□□ 0.69
COX6A1-203ENST00000550009 CYP2D6P10635 497 aa19.36■□□□□ 0.69
COX6A1-203ENST00000550009 PDE3AQ14432 1141 aa19.36■□□□□ 0.69
COX6A1-203ENST00000550009 SLC9C2Q5TAH2 1124 aa19.36■□□□□ 0.69
COX6A1-203ENST00000550009 TSHZ3Q63HK5 1081 aa19.36■□□□□ 0.69
COX6A1-203ENST00000550009 POTEEQ6S8J3 1075 aa19.36■□□□□ 0.69
COX6A1-203ENST00000550009 LCORLQ8N3X6 602 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms