RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 NOL10Q9BSC4 688 aaKnown RBP11.9□□□□□ -0.5
HDAC7-229ENST00000549883 DNAJC18Q9H819 358 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 PAG1Q9NWQ8 432 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 TBC1D12O60347 775 aa11.89□□□□□ -0.51
HDAC7-229ENST00000549883 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-229ENST00000549883 PTPRAP18433 802 aa11.89□□□□□ -0.51
HDAC7-229ENST00000549883 PPATQ06203 517 aa11.89□□□□□ -0.51
HDAC7-229ENST00000549883 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
HDAC7-229ENST00000549883 EXOC6Q8TAG9 804 aa11.89□□□□□ -0.51
HDAC7-229ENST00000549883 CFHR5Q9BXR6 569 aa11.89□□□□□ -0.51
HDAC7-229ENST00000549883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.89□□□□□ -0.51
HDAC7-229ENST00000549883 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
HDAC7-229ENST00000549883 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
HDAC7-229ENST00000549883 CETPP11597 493 aa11.88□□□□□ -0.51
HDAC7-229ENST00000549883 PLCG2P16885 1265 aa11.88□□□□□ -0.51
HDAC7-229ENST00000549883 SNAPC2Q13487 334 aa11.88□□□□□ -0.51
HDAC7-229ENST00000549883 TTF1Q15361 905 aaPredicted RBP11.88□□□□□ -0.51
HDAC7-229ENST00000549883 LCORLQ8N3X6 602 aa11.88□□□□□ -0.51
HDAC7-229ENST00000549883 ECHDC1Q9NTX5 307 aa11.88□□□□□ -0.51
HDAC7-229ENST00000549883 KCNH4Q9UQ05 1017 aa11.88□□□□□ -0.51
HDAC7-229ENST00000549883 MAGEB6P1A0A0J9YX57 407 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 SMIM22K7EJ46 135 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 PRKAB2O43741 272 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
HDAC7-229ENST00000549883 FKTNO75072 461 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 ADD2P35612 726 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 IRX6P78412 446 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-229ENST00000549883 TAF1CQ15572 869 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-229ENST00000549883 GPAT2Q6NUI2 795 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 SDR42E1Q8WUS8 393 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 ARMT1Q9H993 441 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 AFG3L2Q9Y4W6 797 aa11.87□□□□□ -0.51
HDAC7-229ENST00000549883 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
HDAC7-229ENST00000549883 MBD4O95243 580 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 CYP2D6P10635 497 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 CAP2P40123 477 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 USP5P45974 858 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 PLCD1P51178 756 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
HDAC7-229ENST00000549883 CTU1Q7Z7A3 348 aaKnown RBP11.86□□□□□ -0.51
HDAC7-229ENST00000549883 CD99L2Q8TCZ2 262 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
HDAC7-229ENST00000549883 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 CCDC85CA6NKD9 419 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 PDHXO00330 501 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 IGSF3O75054 1194 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 GDF11O95390 407 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 IGHDP01880 384 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 ANKRD45Q5TZF3 282 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 OTUD7BQ6GQQ9 843 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 METTL16Q86W50 562 aaKnown RBP11.85□□□□□ -0.51
HDAC7-229ENST00000549883 PI4K2BQ8TCG2 481 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 PUS7LQ9H0K6 701 aaKnown RBP11.85□□□□□ -0.51
HDAC7-229ENST00000549883 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
HDAC7-229ENST00000549883 HERC5Q9UII4 1024 aaKnown RBP11.85□□□□□ -0.51
HDAC7-229ENST00000549883 SALL3Q9BXA9 1300 aa11.85□□□□□ -0.51
HDAC7-229ENST00000549883 A0A0G2JLL6 359 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-229ENST00000549883 CXCL11O14625 94 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 CYP2C8P10632 490 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 SPP2Q13103 211 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 HDAC1Q13547 482 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-229ENST00000549883 GADL1Q6ZQY3 521 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 PRRT2Q7Z6L0 340 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-229ENST00000549883 ANKRD23Q86SG2 305 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-229ENST00000549883 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-229ENST00000549883 ZFYVE28Q9HCC9 887 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 LOC285556D6RIA3 1793 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 MYH8P13535 1937 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 ADGRA2Q96PE1 1338 aa11.84□□□□□ -0.51
HDAC7-229ENST00000549883 CYP2D7A0A087X1C5 515 aa11.83□□□□□ -0.52
HDAC7-229ENST00000549883 CTGFP29279 349 aa11.83□□□□□ -0.52
HDAC7-229ENST00000549883 SP3Q02447 781 aa11.83□□□□□ -0.52
HDAC7-229ENST00000549883 TREML2Q5T2D2 321 aa11.83□□□□□ -0.52
HDAC7-229ENST00000549883 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
HDAC7-229ENST00000549883 CRNKL1Q9BZJ0 848 aaKnown RBP11.83□□□□□ -0.52
HDAC7-229ENST00000549883 DCP1AQ9NPI6 582 aaPredicted RBP11.83□□□□□ -0.52
HDAC7-229ENST00000549883 TRIM17Q9Y577 477 aa11.83□□□□□ -0.52
HDAC7-229ENST00000549883 MGAMO43451 1857 aa11.83□□□□□ -0.52
HDAC7-229ENST00000549883 DOCK3Q8IZD9 2030 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 TLR2O60603 784 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 HLA-DOAP06340 250 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 MX1P20591 662 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 SHMT1P34896 483 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 UBE3CQ15386 1083 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 KBTBD3Q8NAB2 608 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 SLC44A5Q8NCS7 719 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 OSBP2Q969R2 916 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 DYNLL2Q96FJ2 89 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC7-229ENST00000549883 MCM9Q9NXL9 1143 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 SERPINB13Q9UIV8 391 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
HDAC7-229ENST00000549883 USP17L5A8MUK1 530 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms