RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 PSEN1P49768 467 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 SP3Q02447 781 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 AACSQ86V21 672 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 TEX11Q8IYF3 940 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 BRI3BPQ8WY22 251 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 PTPN18Q99952 460 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 CCDC8Q9H0W5 538 aaPredicted RBP12.73□□□□□ -0.37
CCDC38-207ENST00000549752 ZBTB40Q9NUA8 1239 aa12.73□□□□□ -0.37
CCDC38-207ENST00000549752 DBNLQ9UJU6 430 aaKnown RBP12.73□□□□□ -0.37
CCDC38-207ENST00000549752 RBBP6Q7Z6E9 1792 aaKnown RBP12.73□□□□□ -0.37
CCDC38-207ENST00000549752 TBC1D12O60347 775 aa12.72□□□□□ -0.37
CCDC38-207ENST00000549752 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
CCDC38-207ENST00000549752 RHBDL3P58872 404 aa12.72□□□□□ -0.37
CCDC38-207ENST00000549752 KIF22Q14807 665 aa12.72□□□□□ -0.37
CCDC38-207ENST00000549752 TTF1Q15361 905 aaPredicted RBP12.72□□□□□ -0.37
CCDC38-207ENST00000549752 SCYL3Q8IZE3 742 aa12.72□□□□□ -0.37
CCDC38-207ENST00000549752 EAF2Q96CJ1 260 aaPredicted RBP12.72□□□□□ -0.37
CCDC38-207ENST00000549752 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
CCDC38-207ENST00000549752 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
CCDC38-207ENST00000549752 SNRKQ9NRH2 765 aa12.72□□□□□ -0.37
CCDC38-207ENST00000549752 PDE4DIPQ5VU43 2346 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 CXCL11O14625 94 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.37
CCDC38-207ENST00000549752 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.37
CCDC38-207ENST00000549752 RGS19P49795 217 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 PPP4CP60510 307 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 MAP3K12Q12852 859 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 FASTKD5Q7L8L6 764 aaKnown RBP12.71□□□□□ -0.37
CCDC38-207ENST00000549752 ZFPM1Q8IX07 1006 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 RHPN1Q8TCX5 695 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 ZNF384Q8TF68 577 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 OSBPL5Q9H0X9 879 aaPredicted RBP12.71□□□□□ -0.37
CCDC38-207ENST00000549752 R3HDMLQ9H3Y0 253 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 DDX4Q9NQI0 724 aaKnown RBP12.71□□□□□ -0.37
CCDC38-207ENST00000549752 HERC5Q9UII4 1024 aaKnown RBP12.71□□□□□ -0.37
CCDC38-207ENST00000549752 HPS5Q9UPZ3 1129 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 KCNH4Q9UQ05 1017 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 TRIM17Q9Y577 477 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
CCDC38-207ENST00000549752 SIPA1L1O43166 1804 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
CCDC38-207ENST00000549752 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 TLR2O60603 784 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 IDH1O75874 414 aaKnown RBP12.7□□□□□ -0.38
CCDC38-207ENST00000549752 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
CCDC38-207ENST00000549752 ZAP70P43403 619 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 MLLT1Q03111 559 aaPredicted RBP12.7□□□□□ -0.38
CCDC38-207ENST00000549752 ANKRD23Q86SG2 305 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC38-207ENST00000549752 AATFQ9NY61 560 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC38-207ENST00000549752 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 LOC285556D6RIA3 1793 aa12.7□□□□□ -0.38
CCDC38-207ENST00000549752 KIAA0100Q14667 2235 aaKnown RBP12.7□□□□□ -0.38
CCDC38-207ENST00000549752 BTBD19C9JJ37 291 aa12.69□□□□□ -0.38
CCDC38-207ENST00000549752 GNRH1P01148 92 aa12.69□□□□□ -0.38
CCDC38-207ENST00000549752 CYP7A1P22680 504 aa12.69□□□□□ -0.38
CCDC38-207ENST00000549752 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
CCDC38-207ENST00000549752 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
CCDC38-207ENST00000549752 CD99L2Q8TCZ2 262 aa12.69□□□□□ -0.38
CCDC38-207ENST00000549752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCDC38-207ENST00000549752 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
CCDC38-207ENST00000549752 ZHX2Q9Y6X8 837 aa12.69□□□□□ -0.38
CCDC38-207ENST00000549752 DOCK3Q8IZD9 2030 aa12.68□□□□□ -0.38
CCDC38-207ENST00000549752 HLA-DOAP06340 250 aa12.68□□□□□ -0.38
CCDC38-207ENST00000549752 PTPRAP18433 802 aa12.68□□□□□ -0.38
CCDC38-207ENST00000549752 SH3RF3Q8TEJ3 882 aaPredicted RBP12.68□□□□□ -0.38
CCDC38-207ENST00000549752 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
CCDC38-207ENST00000549752 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
CCDC38-207ENST00000549752 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
CCDC38-207ENST00000549752 A0A0G2JLL6 359 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-207ENST00000549752 APBB1O00213 710 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 PDHXO00330 501 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 PRMT2P55345 433 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 PRRT2Q7Z6L0 340 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-207ENST00000549752 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-207ENST00000549752 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-207ENST00000549752 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 TGFBRAP1Q8WUH2 860 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 AS3MTQ9HBK9 375 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
CCDC38-207ENST00000549752 GINM1Q9NU53 330 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 PTPN22Q9Y2R2 807 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 SLC45A1Q9Y2W3 748 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
CCDC38-207ENST00000549752 TNRC18O15417 2968 aaPredicted RBP12.67□□□□□ -0.38
CCDC38-207ENST00000549752 HOXD10P28358 340 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 CAP2P40123 477 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 USP5P45974 858 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC38-207ENST00000549752 NBPF11Q86T75 865 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 LRRCC1Q9C099 1032 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
CCDC38-207ENST00000549752 ZSWIM8A7E2V4 1837 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms